Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5307 131 4e-25 seq265 131 4e-25 seq808 122 2e-22 seq331 122 2e-22 seq304 102 2e-16 seq298 102 2e-16 seq647 93.3 1e-13 seq13 93.3 1e-13 seq45 91.5 3e-13 seq125 84.2 5e-11 seq56 84.2 5e-11 >seq5307 Length=1324 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | || | ||| ||||| |||||||||||||| | | Sbjct 955 CCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAG 896 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||||| || || || ||||||||||| || | |||| Sbjct 895 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 836 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || |||||||| ||||| | || || |||| || || | || || Sbjct 835 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACC 776 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 775 TCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729 >seq265 Length=2261556 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 841142 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 841083 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||| | | || ||| | || Sbjct 841082 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGA 841023 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 841022 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 840963 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||||||||| || || || ||||| |||||||| Sbjct 840962 TCGAGGGTGATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916 >seq808 Length=762264 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 448038 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 447979 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | | |||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 447978 AAGATATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 447919 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 447918 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACC 447859 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || || || | ||| |||||||| Sbjct 447858 TCGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812 >seq331 Length=2147541 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 851468 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 851409 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||| | | || ||| | || Sbjct 851408 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGA 851349 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| | Sbjct 851348 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCC 851289 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| ||||| ||||||||||| | || || ||||| |||||||| Sbjct 851288 TTGAGGGTGATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCAT 851242 >seq304 Length=2338375 Score = 102 bits (112), Expect = 2e-16 Identities = 142/197 (72%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 |||| ||||| |||||||||||||| |||| |||| || ||||| | ||||| ||| Sbjct 1425258 GTGCACTCTTTATGGATATTATAGTC--CGAGAGTGCTGCCATCTTCCAGCTGTTTGCCT 1425201 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || || ||||||||||| || | |||||| || || || || || ||||| ||||| Sbjct 1425200 GCAAAAATCAGACGCTGCTGGTCAGATGGGATGCCCTCCTTGTCTTGTATTTTAGCTTTG 1425141 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || | || ||| || || | | || || ||||| ||||| || |||| ||| Sbjct 1425140 ACAGTCTCAGTAGTGTCCCTGGGCCCGGACTC-AGTGTGATGGTCTTGCCCATCAGGGTC 1425082 Query 288457 TTGACGAATATCTGCAT 288473 || || || |||||||| Sbjct 1425081 TTCACAAAGATCTGCAT 1425065 >seq298 Length=2265018 Score = 102 bits (112), Expect = 2e-16 Identities = 160/227 (70%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | || | ||| ||||| |||||||| ||||| | | Sbjct 584599 CCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAGAG 584658 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||| || || || | ||||| || | || ||||||||||| || | |||| Sbjct 584659 AG--TGCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGG 584716 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || |||| ||| ||||| || || || |||| || || | || || Sbjct 584717 ATGCCCTCCTTGTCTTGGA-TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 584775 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| || ||||| ||||| || || ||||||| Sbjct 584776 TCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822 >seq647 Length=1105866 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||| | | |||||||| ||||| | ||| || || | ||| Sbjct 850241 TCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGTAAAG 850182 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || ||| | || |||||||| ||||||||||| || | || || ||| Sbjct 850181 ATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCTTTACATTT 850122 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 ||||| | ||| | ||| | || || |||| |||||||| || || || | | | Sbjct 850121 TCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGCGTTTCCATG 850062 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 850061 AAAATCTGCAT 850051 >seq13 Length=8615514 Score = 93.3 bits (102), Expect = 1e-13 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCG-AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||| ||||||||||||| | | || |||| || || | | | ||| ||||| || Sbjct 1044058 TCTTTCAGGATATTATAGTCTGAGAAGAGTGCAGCCATCCTACAGCTATTTGCCTGCCAA 1044117 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| |||| || | |||| | || || || || |||||||| ||||| || || Sbjct 1044118 TATCAGGTGCTGCTGGTCAGATGGGGTGCC-TCCTTGTCTTGGATTTTAGCTTTGACATT 1044176 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || || | || || || || ||||| ||||| || ||||| ||||| || Sbjct 1044177 CTCAATAGTGTCCCTGGGCTCAACCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCAC 1044236 Query 288462 GAATATCTGC 288471 || |||||| Sbjct 1044237 AAAGATCTGC 1044246 >seq45 Length=5545317 Score = 91.5 bits (100), Expect = 3e-13 Identities = 138/194 (71%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTT-TTCCTGCGAA 288341 ||||| |||||||||||||| | ||| ||| | || || || | |||| || | || Sbjct 1737708 TCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCATCCTCCAGCTGTTGGCCCCACAAA 1737767 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||||| ||| || | |||||| || || || || |||||||| ||||| || || Sbjct 1737768 AATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATT 1737827 Query 288402 TTCTATAGAATC--GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || | | || ||| | || ||||| ||||| ||||| || ||||| ||||| Sbjct 1737828 CTCAGTGGTGTCAGGCTTG-----ACCTCGAGTGTGATGGTCTTGCCTGTCAGGGTCTTC 1737882 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 1737883 ACAAAAATCTGCAT 1737896 >seq125 Length=3779757 Score = 84.2 bits (92), Expect = 5e-11 Identities = 140/199 (70%), Gaps = 5/199 (3%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGT---GCGT-CCGTCTTCTAATTGTTTTCCTGCG 288339 |||| |||||||||||||| | ||| | |||| || || || | ||| | || | Sbjct 1449611 CTTTCTGGATATTATAGTCTGAGAGATTGTGGCGTGCCATCCTCCAGCTGTGTGCCCACA 1449552 Query 288340 AAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || |||||| |||| ||| | |||||| || || || || |||||||| ||||| || Sbjct 1449551 AAAATCAGATGCTGCTGATCAGGTGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACA 1449492 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC-TT 288458 || || | || || || | | || | ||||||||| ||||| || || ||| || Sbjct 1449491 TTCTCAACAGTGTCACTGGTCTTGACCTTGAGCGTGATGGTCTTGCCCCTCTACGTCTTT 1449432 Query 288459 GACGAATATCTGCATTATG 288477 || || ||||||||| || Sbjct 1449431 CACAAAGATCTGCATTGTG 1449413 >seq56 Length=5443799 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 10/194 (5%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| | |||||||||||| | ||| | ||| || |||| ||||| || Sbjct 2722528 TCTTTCTAGATATTATAGTCTGAGAGATATCCTCCAGCT-------GTTTGCCTGCAAAA 2722580 Query 288343 ATCAGACGCTGTTGAGAATC---TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||||| |||| || || ||| || || || || || |||||||| ||||| || Sbjct 2722581 ATCAGATGCTGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGATTTTAGCTTTAACA 2722640 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || | || || || || ||||| ||||| || ||||||||||| Sbjct 2722641 TTCTCCATGGTGTCACTGGGCTCAACCTCCAGTGTGATGGTCTTGCCCGTCAGAGTCTTC 2722700 Query 288460 ACGAATATCTGCAT 288473 || || ||| |||| Sbjct 2722701 ACAAAGATCCGCAT 2722714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179539969468138