Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 131 4e-25
seq265 131 4e-25
seq808 122 2e-22
seq331 122 2e-22
seq304 102 2e-16
seq298 102 2e-16
seq647 93.3 1e-13
seq13 93.3 1e-13
seq45 91.5 3e-13
seq125 84.2 5e-11
seq56 84.2 5e-11
>seq5307
Length=1324
Score = 131 bits (144), Expect = 4e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || | || | ||| ||||| |||||||||||||| | |
Sbjct 955 CCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAG 896
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | ||||| || || || ||||||||||| || | ||||
Sbjct 895 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 836
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || |||||||| ||||| | || || |||| || || | || ||
Sbjct 835 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACC 776
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 775 TCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq265
Length=2261556
Score = 131 bits (144), Expect = 4e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| | || ||||||| ||| || ||||| || || ||||| |
Sbjct 841142 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 841083
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||||| ||||| | ||| || || || |||||| | | || ||| | ||
Sbjct 841082 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGA 841023
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || |||||||| | ||| | ||| ||
Sbjct 841022 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 840963
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||||||||| || || || ||||| ||||||||
Sbjct 840962 TCGAGGGTGATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916
>seq808
Length=762264
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || ||||||| ||| || ||||| || || ||||| |
Sbjct 448038 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 447979
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| | |||| ||||| | ||| || || || |||||||| | || ||| | ||
Sbjct 447978 AAGATATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 447919
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || |||||||| | ||| | ||| ||
Sbjct 447918 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACC 447859
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| || || || || | ||| ||||||||
Sbjct 447858 TCGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812
>seq331
Length=2147541
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || ||||||| ||| || ||||| || || ||||| |
Sbjct 851468 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 851409
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||||| ||||| | ||| || || || |||||| | | || ||| | ||
Sbjct 851408 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGA 851349
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || |||||||| | ||| | ||| |
Sbjct 851348 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCC 851289
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| ||| ||||| ||||||||||| | || || ||||| ||||||||
Sbjct 851288 TTGAGGGTGATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCAT 851242
>seq304
Length=2338375
Score = 102 bits (112), Expect = 2e-16
Identities = 142/197 (72%), Gaps = 3/197 (2%)
Strand=Plus/Minus
Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336
|||| ||||| |||||||||||||| |||| |||| || ||||| | ||||| |||
Sbjct 1425258 GTGCACTCTTTATGGATATTATAGTC--CGAGAGTGCTGCCATCTTCCAGCTGTTTGCCT 1425201
Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396
|| || ||||||||||| || | |||||| || || || || || ||||| |||||
Sbjct 1425200 GCAAAAATCAGACGCTGCTGGTCAGATGGGATGCCCTCCTTGTCTTGTATTTTAGCTTTG 1425141
Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| | || ||| || || | | || || ||||| ||||| || |||| |||
Sbjct 1425140 ACAGTCTCAGTAGTGTCCCTGGGCCCGGACTC-AGTGTGATGGTCTTGCCCATCAGGGTC 1425082
Query 288457 TTGACGAATATCTGCAT 288473
|| || || ||||||||
Sbjct 1425081 TTCACAAAGATCTGCAT 1425065
>seq298
Length=2265018
Score = 102 bits (112), Expect = 2e-16
Identities = 160/227 (70%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || | || | ||| ||||| |||||||| ||||| | |
Sbjct 584599 CCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAGAG 584658
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| |||| || || || | ||||| || | || ||||||||||| || | ||||
Sbjct 584659 AG--TGCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGG 584716
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || |||| ||| ||||| || || || |||| || || | || ||
Sbjct 584717 ATGCCCTCCTTGTCTTGGA-TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 584775
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | ||||| ||||| || ||||| ||||| || || |||||||
Sbjct 584776 TCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822
>seq647
Length=1105866
Score = 93.3 bits (102), Expect = 1e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || ||||| | | |||||||| ||||| | ||| || || | |||
Sbjct 850241 TCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGTAAAG 850182
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | || ||| | || |||||||| ||||||||||| || | || || |||
Sbjct 850181 ATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCTTTACATTT 850122
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
||||| | ||| | ||| | || || |||| |||||||| || || || | | |
Sbjct 850121 TCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGCGTTTCCATG 850062
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 850061 AAAATCTGCAT 850051
>seq13
Length=8615514
Score = 93.3 bits (102), Expect = 1e-13
Identities = 136/190 (72%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCG-AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||| ||||||||||||| | | || |||| || || | | | ||| ||||| ||
Sbjct 1044058 TCTTTCAGGATATTATAGTCTGAGAAGAGTGCAGCCATCCTACAGCTATTTGCCTGCCAA 1044117
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| |||| || | |||| | || || || || |||||||| ||||| || ||
Sbjct 1044118 TATCAGGTGCTGCTGGTCAGATGGGGTGCC-TCCTTGTCTTGGATTTTAGCTTTGACATT 1044176
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || || | || || || || ||||| ||||| || ||||| ||||| ||
Sbjct 1044177 CTCAATAGTGTCCCTGGGCTCAACCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCAC 1044236
Query 288462 GAATATCTGC 288471
|| ||||||
Sbjct 1044237 AAAGATCTGC 1044246
>seq45
Length=5545317
Score = 91.5 bits (100), Expect = 3e-13
Identities = 138/194 (71%), Gaps = 8/194 (4%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTT-TTCCTGCGAA 288341
||||| |||||||||||||| | ||| ||| | || || || | |||| || | ||
Sbjct 1737708 TCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCATCCTCCAGCTGTTGGCCCCACAAA 1737767
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||||| ||| || | |||||| || || || || |||||||| ||||| || ||
Sbjct 1737768 AATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATT 1737827
Query 288402 TTCTATAGAATC--GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| | | || ||| | || ||||| ||||| ||||| || ||||| |||||
Sbjct 1737828 CTCAGTGGTGTCAGGCTTG-----ACCTCGAGTGTGATGGTCTTGCCTGTCAGGGTCTTC 1737882
Query 288460 ACGAATATCTGCAT 288473
|| || ||||||||
Sbjct 1737883 ACAAAAATCTGCAT 1737896
>seq125
Length=3779757
Score = 84.2 bits (92), Expect = 5e-11
Identities = 140/199 (70%), Gaps = 5/199 (3%)
Strand=Plus/Minus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGT---GCGT-CCGTCTTCTAATTGTTTTCCTGCG 288339
|||| |||||||||||||| | ||| | |||| || || || | ||| | || |
Sbjct 1449611 CTTTCTGGATATTATAGTCTGAGAGATTGTGGCGTGCCATCCTCCAGCTGTGTGCCCACA 1449552
Query 288340 AAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| |||||| |||| ||| | |||||| || || || || |||||||| ||||| ||
Sbjct 1449551 AAAATCAGATGCTGCTGATCAGGTGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACA 1449492
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC-TT 288458
|| || | || || || | | || | ||||||||| ||||| || || ||| ||
Sbjct 1449491 TTCTCAACAGTGTCACTGGTCTTGACCTTGAGCGTGATGGTCTTGCCCCTCTACGTCTTT 1449432
Query 288459 GACGAATATCTGCATTATG 288477
|| || ||||||||| ||
Sbjct 1449431 CACAAAGATCTGCATTGTG 1449413
>seq56
Length=5443799
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/194 (70%), Gaps = 10/194 (5%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| | |||||||||||| | ||| | ||| || |||| ||||| ||
Sbjct 2722528 TCTTTCTAGATATTATAGTCTGAGAGATATCCTCCAGCT-------GTTTGCCTGCAAAA 2722580
Query 288343 ATCAGACGCTGTTGAGAATC---TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||||| |||| || || ||| || || || || || |||||||| ||||| ||
Sbjct 2722581 ATCAGATGCTGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGATTTTAGCTTTAACA 2722640
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || | || || || || ||||| ||||| || |||||||||||
Sbjct 2722641 TTCTCCATGGTGTCACTGGGCTCAACCTCCAGTGTGATGGTCTTGCCCGTCAGAGTCTTC 2722700
Query 288460 ACGAATATCTGCAT 288473
|| || ||| ||||
Sbjct 2722701 ACAAAGATCCGCAT 2722714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179539969468138
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