Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 114 1e-20
seq298 104 3e-17
seq129 91.5 2e-13
seq1241 89.7 6e-13
seq458 89.7 6e-13
seq325 89.7 6e-13
seq304 84.2 2e-11
>seq5307
Length=1324
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | ||| | |||||| || | ||| ||| || || ||||| || || |
Sbjct 956 ACCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGA 897
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| || | || || ||||| || || || || || || ||||||||||| | |||
Sbjct 896 GAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 837
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| || ||||||||| |||||| |||| || | | ||||| || | || ||
Sbjct 836 GATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGAC 777
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | |||||||| |||||||| || ||||| |||||||| |||||
Sbjct 776 CTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq298
Length=2265018
Score = 104 bits (114), Expect = 3e-17
Identities = 161/228 (71%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | ||| | |||||| |||| ||| ||| || || ||||| || ||||
Sbjct 584598 ACCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAG- 584656
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| || | || || ||||| || || | || || || ||||||||||| | |||
Sbjct 584657 -AGAGTGCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGG 584715
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| || |||||||| | || ||| ||||| || | | ||||| || | || ||
Sbjct 584716 GATGCCCTCCTTGT-CTTGGATTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGAC 584774
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||||||| |||||||| || ||||| |||||| | |||||
Sbjct 584775 CTCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822
>seq129
Length=3840824
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 538945 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 538886
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 538885 TACTAACGAGGAT 538873
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 554101 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 554042
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 554041 TACTAACGAGGA 554030
>seq1241
Length=281424
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 271604 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 271545
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 271544 TACTAACGAGGA 271533
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 275782 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 275723
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 275722 TACTAACGAGGA 275711
>seq458
Length=1662263
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 1194329 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 1194270
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 1194269 TATACTAACGAGGA 1194256
>seq325
Length=1976410
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1943138 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1943197
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 1943198 TACTAACGAGGA 1943209
>seq304
Length=2338375
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
|||||| | || |||| ||| || || ||||| || || | ||||| | | || ||
Sbjct 1425271 CACCAAGTACAGGGTGCACTCTTTATGGATATTATAGTCCG--AGAGTGCTGCCATCTTC 1425214
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
||||| || || || || || || ||||||||||| | ||| | || |||||||||
Sbjct 1425213 CAGCTGTTTGCCTGCAAAAATCAGACGCTGCTGGTCAGATGGGATGCCCTCCTTGTCTTG 1425154
Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
||||| ||||| ||| | ||||| || | || | | |||||||| ||
Sbjct 1425153 TATTTTAGCTTTGACAGTCTCAGTAGTGTCCCT-GGGCCCGGACTCAGTGTGATGGTCTT 1425095
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| | || ||||| |||||||| |||||
Sbjct 1425094 GCCCATCAGGGTCTTCACAAAGATCTGCAT 1425065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543161391698640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |