Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq265 116 4e-21
seq331 114 1e-20
seq808 109 5e-19
seq5307 104 2e-17
seq647 100 3e-16
seq920 96.9 3e-15
seq376 86.0 6e-12
seq298 84.2 2e-11
seq71 84.2 2e-11
>seq265
Length=2261556
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || |||||||||||||| || | | || || |
Sbjct 841131 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 841072
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| || |||||||| ||| | || | | ||||| || |||||||||||||| ||
Sbjct 841071 ATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 841012
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || ||||||| || | |||||| || || || || | || |
Sbjct 841011 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGAT 840952
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| ||||| | ||||| |||||||| ||||| ||
Sbjct 840951 GGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATCTT 840913
>seq331
Length=2147541
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || |||||||||||||| || |
Sbjct 851469 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 851410
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| || |||||||| ||| | || | | ||||| || |||||
Sbjct 851409 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGG 851350
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || | |||||| || || |
Sbjct 851349 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGC 851290
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| | || | |||||| ||||| || ||||| |||||||| ||||| ||
Sbjct 851289 CTTGAGGGTGATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCATCTT 851239
>seq808
Length=762264
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || |||||||||||||| || |
Sbjct 448039 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 447980
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| | | | | ||||| || |||||||| ||| | || || | ||||| || |||||
Sbjct 447979 CAAGATATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 447920
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || | |||||| || || ||
Sbjct 447919 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAAC 447860
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||| || || | ||||| | |||||| |||||
Sbjct 447859 CTCGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812
>seq5307
Length=1324
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | |||||| | || | || || ||||| || || || || ||||
Sbjct 956 ACCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGA 897
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | || || ||||| ||||| ||| |||| || ||||||||||| || ||
Sbjct 896 GAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 837
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
|| || || || ||||| | |||| ||||| || ||| | || |||| || || |
Sbjct 836 GATGCCCTCCTTGTCTTGGA-TTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGA 778
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || | || | ||||||||| |||| || || || || || |||||
Sbjct 777 CCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq647
Length=1105866
Score = 100 bits (110), Expect = 3e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || |||||||||||||| || | | ||||| | ||||| || ||||||||
Sbjct 850247 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCA 850188
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
| | | || || | ||||| || |||||||||||||| || || || || || ||||
Sbjct 850187 GTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCTTT 850128
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | |||||| || || | || | ||| |||||||| || || | |||
Sbjct 850127 ACATTTTCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGCGTT 850068
Query 64427 TTTACGAAAATTTGCATTTT 64446
| | |||||| ||||| ||
Sbjct 850067 TCCATGAAAATCTGCATCTT 850048
>seq920
Length=534542
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | | | ||||||| || | || |||||||||||||| || |
Sbjct 150003 ACCACCACGAAGTCTCAACCCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGA 150062
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| || |||||||| ||| | || || | ||||| || |||||
Sbjct 150063 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 150122
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || | || || || ||||||| || |||||| || || ||
Sbjct 150123 AATTCCTTCCTTATTCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAAC 150182
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| | || | |||||| || || | ||||| |||||||| ||||| ||
Sbjct 150183 CTTGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 150233
>seq376
Length=1527771
Score = 86.0 bits (94), Expect = 6e-12
Identities = 154/226 (68%), Gaps = 7/226 (3%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || |||||||||||||| || |
Sbjct 1196510 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 1196451
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| || |||||||| | | | || || | ||||| || |||||
Sbjct 1196450 CAAAGTATGTCCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGG 1196391
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || ||||||| || | |||||| || || ||
Sbjct 1196390 AATTCCTTCCTTATCCTG-------GCCTTTACATTTTCTATTGTATCCGAGGGTTCAAC 1196338
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGC 64441
|| | || | |||||| || || | || || |||||||| |||
Sbjct 1196337 CTCCAGGGTGATGGTCTTCCCAGTAAGGGTCTTCACGAAAATCTGC 1196292
>seq298
Length=2265018
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/229 (69%), Gaps = 5/229 (2%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | |||||| | || | || || ||||| || || || || || |
Sbjct 584598 ACCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAGA 584657
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | || || ||||| ||||| || |||| || ||||||||||| || ||
Sbjct 584658 GA--GTGCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGG 584715
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
|| || || || ||||| | ||| ||||| ||| ||| | || |||| || || |
Sbjct 584716 GATGCCCTCCTTGTCTTGGA--TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGA 584773
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || || | ||||||||| |||| || || || || | |||||
Sbjct 584774 CCTCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822
>seq71
Length=4921646
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|| ||||||| || || || ||||||||||||||| | | || || | |||||
Sbjct 1110224 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAACC----AAAGTACGTCCCTCTTCC 1110279
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|| | |||||| ||| | || || | ||||| || |||||||||||||| || | ||
Sbjct 1110280 AGTTACTTGCCAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATTCTGG 1110339
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414
|| || ||||||| || | |||||| || || || | ||| | ||||||
Sbjct 1110340 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCGTGAGAGTGATGGTCTTC 1110399
Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| || ||||| |||||||| ||||| ||
Sbjct 1110400 AGAGCCAGGGTTTTCACGAAAATCTGCATCTT 1110431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499597514865240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |