Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_011041.1
Length=137947
Score E
Sequences producing significant alignments: (Bits) Value
seq6988 136 3e-27
seq4817 125 6e-24
>seq6988
Length=1074
Score = 136 bits (150), Expect = 3e-27
Identities = 205/291 (70%), Gaps = 3/291 (1%)
Strand=Plus/Plus
Query 134663 ATCCCTCATTAAGCCCAGCCAAACGGAATGCTCCAGGCTATCATCGTAGTGCTCAAAAGC 134722
||||| |||||| |||| ||||| |||||||||||| | ||||||||| ||| || ||
Sbjct 462 ATCCCGCATTAAACCCAACCAAATGGAATGCTCCAGCCCATCATCGTAATGCGTGAATGC 521
Query 134723 CCTCCCGGTATTGAATGGTGGGTCTATGTAAACACACTTCACTTTGCCTGCATACTCTTG 134782
|| ||||| || | || ||||| || |||| |||||||| || || | | | || ||
Sbjct 522 GCTACCGGTGTTATAGGGCGGGTCGATAAAAACGCACTTCACCTTTCCAGAAAATTCCTG 581
Query 134783 CTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGTTTATTATCAAAAATATC 134842
||| |||||||||| || | | ||| || ||||| ||||| ||||| || || ||
Sbjct 582 CTCCAGCGCCTTCAGCGCCAGCAGGTTGTCGCCAAAGATCAGCCGGTTATCGAAGATGTC 641
Query 134843 GTTTTCGGTCAC---TTTCTGGCTGTGGTAAGACTTGCTAGAATCTTCTAACAAAATGTG 134899
||| || ||||| | || ||| || ||||| | |||||| | || ||| |
Sbjct 642 GTTGTCCGTCACGCGATGCTTCGCGTGATATGACTTTTCCGGATCTTCCAGCAGGATGCG 701
Query 134900 CTGCTCTAACTTTTTGCGCTCGTTTTTACCTATCCAGGTAAGTTCTAATTT 134950
| |||| | ||| |||| | || || ||||| || ||||| | |||
Sbjct 702 CGGCTCCAGCTTGGGCCGCTTCTCCTTGCCGATCCAAGTCAGTTCAAGTTT 752
>seq4817
Length=1474
Score = 125 bits (138), Expect = 6e-24
Identities = 156/210 (74%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 133682 GTAATAGCGGAAGCCACCGCCACCTTGCCAGCTTGCAGACTTAGA--AATACCACCTTGA 133739
||||||||||||||| ||||| |||| ||||| ||| ||| | | || |||||
Sbjct 1096 GTAATAGCGGAAGCCGCCGCCGCCTTTCCAGCCCACAG-CTTCGGTGACGCCCCCCTTG- 1153
Query 133740 TCTTCACCATCAATCACTTTTTGCAAGCGAGGGATAATATGGGTATGACAATGATCACCC 133799
|| |||||||||||||| || | || ||| ||||| || |||||||| || || || |||
Sbjct 1154 TCCTCACCATCAATCACCTTCTTCAGGCGCGGGATGATGTGGGTATGGCAGTGCTCGCCC 1213
Query 133800 AGTTCGATCAAGATCCAACGTCTTTTCATCTTGTGGGCTACAGCAGCAGTAGTTCCCGAA 133859
|| || | || |||||| || | ||| |||||||| || || | || || || |||
Sbjct 1214 AGCTCCACCATGATCCAGCGGCGCCCCATTTTGTGGGCCACCGCGCCGGTGGTGCCGGAA 1273
Query 133860 CCGCCGAATGAATCCAATACCAAATCACCT 133889
|| |||| ||||| | |||||| || |||
Sbjct 1274 CCAGCGAAGGAATCGAGTACCAAGTCTCCT 1303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441260636244120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |