Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_011357.1
Length=62147
Score E
Sequences producing significant alignments: (Bits) Value
seq5788 141 4e-29
>seq5788
Length=1233
Score = 141 bits (156), Expect = 4e-29
Identities = 298/441 (68%), Gaps = 15/441 (3%)
Strand=Plus/Minus
Query 34279 GTTATACCAGTCCACCCACGTTAGTGTGGCCAGTTCCACTTCTGCACGGTTTTTCCAGCT 34338
||| ||||||| |||||| | | || |||| || || || | ||||| |||||
Sbjct 707 GTTGTACCAGTGCACCCATCTCAAGGTCGCCATCTCAACAGCTTCGCGGTTCTTCCATGA 648
Query 34339 CTTACGGTGTATTACCTCCGCTTTGTAAAGACCATTGATGCTCTCAGCCATCGCGTTGTC 34398
| ||||||||| | ||| || ||||| || || ||||| ||||||||| ||||||||
Sbjct 647 TTGACGGTGTATCAGCTCAGCCTTGTACAGCCCGTTGATAGTCTCAGCCAAGGCGTTGTC 588
Query 34399 ATACGAGTCGCCTGTACTCCCTGTTGATGC--CAGTAATCCGGCTTCTTTTAGTCGCTCC 34456
|| |||||| | || || || | || || ||||| ||| || |||||
Sbjct 587 GTAGCTGTCGCCCTTGCTGCCAACCGAGGGTTCAATA--CCGGCCTCTGCCAGCCGCTCG 530
Query 34457 GTATAGGCCAGTGACACATACTGAGAGCCTTTATCGCTGTGATGGATG---------GTG 34507
|| ||| | || |||||||| ||| |||||||||||||| | |
Sbjct 529 GTGTAGCGAATCGAGACATACTGGCTGCCACGGTCGCTGTGATGGATCAGACCACCCGCG 470
Query 34508 CCAGACGGACGACGGGCCCACAACGCCTGCTCCAGCGCATCCAGCACGAATGTCGTT-TC 34566
| | ||| | ||||| ||| || |||||||| |||||||||||||| |||| | |
Sbjct 469 CAATGCGGCTGGCGGGCATACAGGGCTTGCTCCAGAGCATCCAGCACGAA-GTCGGTCTT 411
Query 34567 CATAGACGATGAGACCCGCCACCCCACGATGTATCCGGCAAACACATCAATGATAAACGC 34626
||| | ||| ||||| || ||||| | |||||||| ||||| | || ||
Sbjct 410 CATGCTGGTACTGACTCGCCAGCCAACGATCCGCCGCGCAAACACGTCAATCACGAAGGC 351
Query 34627 CACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCCACCCACAGCTGGTC 34686
|||||| | |||||||||| || ||||| || || || | |||||||||||| |
Sbjct 350 CACATACAGCCAGCCCTGCCAGGTCGACACGTACGTGAAGTCCGACACCCACAGCTGATT 291
Query 34687 AGGTCGTTCTGCCACGAACTG 34707
|| || || || ||||||
Sbjct 290 TGGACGGTCGGCATGGAACTG 270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 198727261432948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |