Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_011611.1
Length=36885
Score E
Sequences producing significant alignments: (Bits) Value
seq5790 107 5e-19
>seq5790
Length=1233
Score = 107 bits (118), Expect = 5e-19
Identities = 190/272 (70%), Gaps = 10/272 (4%)
Strand=Plus/Plus
Query 14966 ATCACGTTCTGGGTCAACCGCCTGGCGCAGTGGATGT--TCTA---CGGCGCGTGCGACC 15020
||| ||||||||||| | | | |||| | |||| | |||| ||| ||| ||| |
Sbjct 879 ATCTCGTTCTGGGTCGA--GAC--GCGCCG-GGATCTCGTCTATTTCGGGGCGATCGATC 933
Query 15021 CGTCCCTGGGTAAGCAAGGCTCCAGTCGCGACCCCAGTGCCATCCTGGTGGGTGGGTTCA 15080
|||| || || |||| | || || ||||| ||||||||| | |||||| |
Sbjct 934 CGTCGCTCGGAAAGCGGAACAAGAGCCGTGACCCATCCGCCATCCTGATCGGTGGGATGG 993
Query 15081 ACCGGGAGACAGGCGTCCTGGACGTGGTCGAGGCCGCCATCCGCAAGCGCCTGCCGGACA 15140
||||| ||| ||| |||||||||||||||| | |||||| || ||||||||||
Sbjct 994 ACCGGCTGACCGGCAAGATGGACGTGGTCGAGGCATCAATCCGCCGCCGTCTGCCGGACA 1053
Query 15141 AGATCATCGAGGACATCATCGCCATGCAACGGGCCTATCACTGCCTGGTGTGGGGTGTCG 15200
|||||||| ||| | |||||| | || || | |||| || || ||||| || |
Sbjct 1054 TGATCATCGCGGATACCATCGCGCTTCAGCGAGAGTATCGGTGTCTCTTGTGGTTCGTGG 1113
Query 15201 AGGCGGTCCAGTTCCAGGAGTTCCTGCGCACC 15232
| ||||||||||||| |||||| | |||
Sbjct 1114 AAAGCATCCAGTTCCAGGAATTCCTGAGGACC 1145
Score = 100 bits (110), Expect = 7e-17
Identities = 171/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 14312 GAAGCGATCAAGGCGGAGCTGGAGTTCAACCCGCGCCTGGCCACCGACTTCCCCCAGGGC 14371
|| || || ||||| |||||| ||||||||| || | || ||||| | |
Sbjct 302 GAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTTCGGTCGGATTTCCCGGATGCG 361
Query 14372 GCCGGCAAGGGCCGCGTCTGGCAGGTCGGCACCATCGTTACGGCGAACGATGCCAAGGTC 14431
||||||||| || ||||||| | ||| || |||| | | | | | | ||
Sbjct 362 TGCGGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTATTACCCGTACCAACGTAATGATC 421
Query 14432 CAGGTCTTCGGCTCCGGCAAGCGGATGCGCGGCCTTCGACACGGCCCGCACCGTCCTGAC 14491
| || | ||||| ||||| || | |||||||| | |||||||| || |||| || |||
Sbjct 422 CTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCGACACGGTCCATACCGACCCGAC 481
Query 14492 CTGGTGATCGGCGACGACCTGGAGAACGACGAGAACGTCCGCAGCCCGGAGCAACGCGAC 14551
|| ||||| ||||||||||||||||||||| |||||| ||||| || || |||
Sbjct 482 CTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGTCCGCGTGCCGGATCAGCGGGAC 541
Query 14552 AAGCTGGA 14559
|| ||||
Sbjct 542 AAATTGGA 549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117899799191794
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |