Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq23 165 1e-35
seq881 104 3e-17
>seq23
Length=7404865
Score = 165 bits (182), Expect = 1e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798
|| || ||||||||||| ||| |||||||||| || || ||||| || ||||| || ||
Sbjct 3588189 GTCTGGAACAACTGCTCATCATCCCATTCCGGATGCTCCTGTTTAAGCACATCACACACT 3588248
Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858
|||||||| |||| ||||| || ||||| |||||||| | || ||||| | || |||
Sbjct 3588249 CTGTTGTGCTCTCGAAGCCAAATCGTGGCATACATCATCAGGCCAGGCACCAGGCCGAAC 3588308
Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918
|| || | |||||| ||||| ||||| | || || || | || | ||| | ||| | |
Sbjct 3588309 ACCTCCTGCCCCACAGCAAACCGCAGGTGTTCAGGGACATGAGGGGGATAGATCATCTCC 3588368
Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACCT 9967
||||| | |||||||| ||||| ||||||| || || ||||| ||||
Sbjct 3588369 ACCTGAGAATCTTTGACTGTGGGAGGATACACCTCTCCATCAATTACCT 3588417
Score = 149 bits (164), Expect = 9e-31
Identities = 202/282 (72%), Gaps = 0/282 (0%)
Strand=Plus/Plus
Query 8894 GGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCT 8953
||||| || ||||| || || || || |||||||| | || || || | ||| |
Sbjct 3586619 GGACAGCCTTTCACGTTATTGCAGATAAGAGACTGAATTGAGGCAGTGTTGATGATTTTA 3586678
Query 8954 AAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTC 9013
|||||||| || || || || ||||| || ||||||||| || || || || ||
Sbjct 3586679 AAACCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTACTGAGGAGAACATATAGGATTG 3586738
Query 9014 GCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATG 9073
|||| || || |||||||| || || || || || || | ||| ||||||| ||||||
Sbjct 3586739 CCCATAAGTCCCTTCAAGGAGAAAGGTGCTCCAAGTTCTACCATGGTCTCACCAAAGATG 3586798
Query 9074 GCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCG 9133
|| | ||||| || || || || | | | ||| || || || | || || |||||
Sbjct 3586799 GCGTCTGGACGAGGCTTCTCTACCAGAAGGGCAGGATACAGCTCCATGGCATCAACGTCA 3586858
Query 9134 CCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175
|||||||||||||| ||||| ||||| || |||||||| |||
Sbjct 3586859 CCATAGAGGGCTTCTAACTCCGCAGCCATTTCCTTCTCGCCT 3586900
Score = 100 bits (110), Expect = 4e-16
Identities = 112/150 (75%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446
||||||||||| || | ||||| |||||||| || || | ||| ||| ||| |||
Sbjct 2331935 TCACCTTTCACACCCATGGGAGTCGGGCAGTCGTCAGCCACAGCAGGAAGAACTCTGGTA 2331994
Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506
|||||||| | ||| ||||| ||||||||||| ||||| |||| | || |||||
Sbjct 2331995 TAATAGGAGATATTAGAAAAGGCTTCCCAGCTTTTGTAACCATGCTGTACATTGTAAGTT 2332054
Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536
|| || |||||||||| | || ||||||
Sbjct 2332055 GGCGGGCTGTCAATCAAATGTGATCTGGCT 2332084
Score = 87.8 bits (96), Expect = 3e-12
Identities = 192/286 (67%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495
|| ||||| || || |||| |||||||| || |||| | || || | || | ||
Sbjct 3587570 CCAGCAATTTGCCTGCTGAATGATTCAACAAACTGGGTCAGCCCATGTTCCATTAATATC 3587629
Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555
|| |||||||| | || || || |||| | || | || |||| |||
Sbjct 3587630 GAGTTGTTGTAGAGAAACTGCCGATAGTTGTACTCCTGATCTTCAATTTGAAAGGTGTCA 3587689
Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615
|||| || | ||||||| ||||||| || || ||||| || || || ||||||||||||
Sbjct 3587690 GGCAGAAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCAGCAATACGGTTCTGGTAC 3587749
Query 9616 TGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673
|| || | ||| ||| || | ||| |||||||| | || | ||||| || || |
Sbjct 3587750 TGGAATTGTTGGT--TGAAAAGCAGCTCTGGGTCAAACTTCAGTTTAAAGTGATAGCCAC 3587807
Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719
| | ||||| ||||| | | || | || ||||| ||||| ||
Sbjct 3587808 TCAAGTGCTGTACATAGTCTTCTATCACGATCTTAATAGTTTCTCC 3587853
>seq881
Length=711898
Score = 104 bits (114), Expect = 3e-17
Identities = 174/249 (70%), Gaps = 2/249 (1%)
Strand=Plus/Plus
Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992
|| || ||||| || |||| || || | || || || || ||||| | ||||| ||
Sbjct 86300 GTGGCTGTTTTGACAATGTTGAAGCCCATCTCGCCACCAAATGTGCTCGACTTCCAATAT 86359
Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052
| || || |||||| |||| | | ||| || || | |||||| |||| || | ||
Sbjct 86360 TCTGGAGAACAGATGGGGTTCCCTAAGAGGCCCTTGAGGGAAAAGGGAGATCCGATTTCT 86419
Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAG-CCAGTGTA 9111
|| || ||||| || ||||||| ||| | || || | || | || || | |||
Sbjct 86420 ATCATACTCTCCCCAAAGATGGAGTTTGGATGGCACTTCTCAA-GAAGCAGTCCCGGGTA 86478
Query 9112 GAGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTC 9171
|| || | || |||| ||| |||||||| |||||||||| || || |||||||||||
Sbjct 86479 GAACTCCAAGGCATCGATGTCTCCATAGAGCTCTTCCAACTCAGCTGCCATCTCCTTCTC 86538
Query 9172 ACCTACAAG 9180
||||||||
Sbjct 86539 TCCTACAAG 86547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723659508191400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |