Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq265 141 2e-28 seq808 136 9e-27 seq331 132 1e-25 seq920 127 5e-24 seq376 120 7e-22 seq647 113 1e-19 seq71 93.3 1e-13 seq416 86.0 1e-11 seq367 84.2 5e-11 >seq265 Length=2261556 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||||| ||||| || ||||| ||||||||||| | ||||||||||| |||||| | Sbjct 841134 AAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACG 841075 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||||||||| ||||| || || ||||| | | ||||| || ||| ||||||||| Sbjct 841074 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTC 841015 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 ||||| ||||| ||| || ||| | || || | | ||| || || | || Sbjct 841014 CTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGT 840955 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || || |||||||| ||||| || Sbjct 840954 GATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTG 840919 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| || ||||| || || ||||| ||||||||||| | |||||| | || |||||| Sbjct 841037 AAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 841096 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 201027 | || || ||||| |||||||| ||||| ||||||||| Sbjct 841097 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTT 841134 >seq808 Length=762264 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| ||||| || ||||| ||||||||||| | ||||||||||| ||| | Sbjct 448032 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATA 447973 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||||||| ||||| || || ||||| || | ||||| || ||| ||||||| Sbjct 447972 TGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCT 447913 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || ||| | || |||| | ||| || || | Sbjct 447912 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGG 447853 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || ||||||| ||||| || Sbjct 447852 GTGATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTG 447815 >seq331 Length=2147541 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| ||||| || ||||| ||||||||||| | ||||||||||| |||||| Sbjct 851462 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 851403 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| ||||| || || ||||| | | ||||| || ||| ||||||| Sbjct 851402 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCT 851343 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || ||| | || || | | ||| | | | Sbjct 851342 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGG 851283 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | |||||||| ||||| || Sbjct 851282 GTGATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTG 851245 Score = 91.5 bits (100), Expect = 3e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| || ||||| || || ||||| ||||||||||| | |||||| | || |||||| Sbjct 851363 AAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 851422 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 | || || ||||| |||||||| ||||| ||||||||||| Sbjct 851423 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCG 851462 >seq920 Length=534542 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| |||| || ||||| |||||||||| | ||||||||||| |||||| Sbjct 150010 CGAAGTCTCAACCCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 150069 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| ||||| || || ||||| || | ||||| || ||| ||||||| Sbjct 150070 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCT 150129 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || | ||| ||||| ||| || ||| || || | | ||| || | | Sbjct 150130 TCCTTATTCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAGG 150189 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || |||||||| ||||| || Sbjct 150190 GTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTG 150227 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| ||||| || || ||||| ||||||||||| | |||||| | || |||||| Sbjct 150109 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 150050 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 | || || |||| |||||||| |||| ||||||||||| Sbjct 150049 TTCAAAAGGAGTTCACTCTTCATCTTGGGTTGAGACTTCG 150010 >seq376 Length=1527771 Score = 120 bits (132), Expect = 7e-22 Identities = 158/218 (72%), Gaps = 7/218 (3%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| ||||| || ||||| ||||||||||| | ||||||||||| |||||| Sbjct 1196503 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 1196444 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||||||| ||||| || | ||||| || | ||||| || ||| ||||||| Sbjct 1196443 TGTCCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCT 1196384 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||| | ||| || ||| | || || | | ||| || |||| Sbjct 1196383 TC---CT----TATCCTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCCAGG 1196331 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || || ||||| ||||| || Sbjct 1196330 GTGATGGTCTTCCCAGTAAGGGTCTTCACGAAAATCTG 1196293 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| ||||| | || ||||| ||||||||||| |||||| | || |||||| Sbjct 1196404 AAAGACTGATCTTTACTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAACA 1196463 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 | || || ||||| |||||||| ||||| ||||||||||| Sbjct 1196464 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCG 1196503 >seq647 Length=1105866 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 199430 AGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTT 199489 ||||| ||||||||||| | ||||||||||| |||||| | |||||||||||| ||||| Sbjct 850250 AGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTG 850191 Query 199490 CCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC 199549 || | ||||| || | ||||| || ||| ||||||||| ||||| ||||| | Sbjct 850190 CCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACC 850131 Query 199550 TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGA 199609 || || ||| | || |||| | ||| | || | |||| ||||| || || || Sbjct 850130 TTTACATTTTCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGC 850071 Query 199610 GTTTTCACAAAAATTTG 199626 |||| || ||||| || Sbjct 850070 GTTTCCATGAAAATCTG 850054 >seq71 Length=4921646 Score = 93.3 bits (102), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||||| || ||||| ||||||||||| | ||||| | ||||||| | Sbjct 1110213 GAAGTCTCAATACAAGATGAAGAGTGGACTCCTTTTGAATGTTGT----AACCAAAGTAC 1110268 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 ||| |||||||| | ||| || || ||||| || | ||||| || ||| |||||||| Sbjct 1110269 GTCCCTCTTCCAGTTACTTGCCAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTT 1110328 Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | | ||| ||||| ||| || ||| | || || | | ||| || | | Sbjct 1110329 CCTTATTCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCGTGAGAG 1110388 Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| ||||| | || |||||||| ||||| || Sbjct 1110389 TGATGGTCTTCAGAGCCAGGGTTTTCACGAAAATCTG 1110425 >seq416 Length=1521731 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| |||||||| ||||| ||||||| | | | ||||||||||| |||||| Sbjct 880267 CGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTGTGGAATGTTGTAGTCAGACAAAGTG 880326 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| || |||| || | || || ||| | || | ||||| | ||| ||||||| Sbjct 880327 CGTCCCGCTGCCAGTTGTCTGCCAGCAAAGCTCAGTCTTTGCTGAACAGGAGGAATTCCT 880386 Query 199529 TC 199530 || Sbjct 880387 TC 880388 >seq367 Length=1988945 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||| | ||||||||||| |||||| | |||||||||||| ||||| || || |||| Sbjct 221007 CCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGA 221066 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || | ||||| || ||| ||||||| Sbjct 221067 TCAGTCTTTGCTGATCAGGAGGAATTCCT 221095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178807240552257