Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 113 5e-20
seq717 111 2e-19
seq298 96.9 4e-15
seq13 86.0 7e-12
>seq5307
Length=1324
Score = 113 bits (124), Expect = 5e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||| || |||||||| ||||| || |||||||| | || || ||||| ||||| || ||
Sbjct 920 CTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAA 861
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| ||||||||||| | || | || ||||||||| ||| || ||| |
Sbjct 860 AATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATT 801
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||||| || | || || || | |||||||| ||||||||||| || || ||
Sbjct 800 CTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCAC 741
Query 46582 AAAGATTTGCAT 46593
|||||| |||||
Sbjct 740 AAAGATCTGCAT 729
>seq717
Length=839118
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| |||| || ||| || |||||||| |||| || |||||||| |
Sbjct 563454 ACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCC 563513
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || ||||| ||||| || || |||| |||||||||| | || | || ||||||
Sbjct 563514 ATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTT 563573
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| ||| || |||| || | | ||||| || | || || || | |||||
Sbjct 563574 GTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGAT 563633
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| ||||||||||| || || |||||||| |||||
Sbjct 563634 GGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669
>seq298
Length=2265018
Score = 96.9 bits (106), Expect = 4e-15
Identities = 159/227 (70%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| |||| | ||| | ||||| |||| || ||| || |||||||| ||||| ||
Sbjct 584599 CCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAGA- 584657
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||||| | || || ||||| ||||| | || |||| ||||||||||| | ||
Sbjct 584658 -GAGTGCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGG 584716
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||||||||| ||| || |||| || | | ||||| || | || ||
Sbjct 584717 ATGCCCTCCTTGTCTTGGAT-TTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 584775
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| |||||||| ||||||||||| || || |||||| | |||||
Sbjct 584776 TCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822
>seq13
Length=8615514
Score = 86.0 bits (94), Expect = 7e-12
Identities = 135/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATA-GAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGA 46460
||| || ||||||| ||||| || | |||||| | || | |||| ||||| || |
Sbjct 1044057 CTCTTTCAGGATATTATAGTCTGAGAAGAGTGCAGCCATCCTACAGCTATTTGCCTGCCA 1044116
Query 46461 ATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCG 46520
|||||| | |||||||||| | || || ||||||||| ||| || ||||
Sbjct 1044117 ATATCAGGTGCTGCTGGTCAGATGGGGTGC-CTCCTTGTCTTGGATTTTAGCTTTGACAT 1044175
Query 46521 TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
|| | | ||||| || | || || || | |||||||| ||||||||||| || || |
Sbjct 1044176 TCTCAATAGTGTCCCTGGGCTCAACCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCA 1044235
Query 46581 CAAAGATTTGC 46591
||||||| |||
Sbjct 1044236 CAAAGATCTGC 1044246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565184907250920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |