Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq265 141 2e-28
seq808 136 9e-27
seq331 136 9e-27
seq376 113 1e-19
seq5307 109 1e-18
seq717 109 1e-18
seq647 105 1e-17
seq71 105 1e-17
seq298 95.1 3e-14
seq45 89.7 1e-12
seq416 86.0 1e-11
>seq265
Length=2261556
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| |||||||| ||||| || | | ||| |
Sbjct 841133 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 841074
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || || ||||| ||| ||| || || |||||||| |||||
Sbjct 841073 CCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCC 841014
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || || || ||| || || || || || ||||| ||| || || |||||
Sbjct 841013 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTG 840954
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | ||||| ||||| | |||||
Sbjct 840953 ATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916
>seq808
Length=762264
Score = 136 bits (150), Expect = 9e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAGTTCT 194981
|||||||| ||||| |||||||||||||| |||||||| ||||| || | ||||| | |
Sbjct 448029 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATATGT 447970
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|||||||| || ||||| || || ||||| |||| ||| || || |||||||| |||||
Sbjct 447969 -CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 447911
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|| || || || || ||| || || || || || || || ||| || || |||||
Sbjct 447910 CTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGT 447851
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | ||||| | ||| | |||||
Sbjct 447850 GATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812
>seq331
Length=2147541
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| |||||||| ||||| || | | ||| |
Sbjct 851459 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 851400
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || || ||||| ||| ||| || || |||||||| |||||
Sbjct 851399 CCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCC 851340
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || || || ||| || || || || || ||||| ||| | | |||||
Sbjct 851339 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTG 851280
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || || ||||| ||||| | |||||
Sbjct 851279 ATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCAT 851242
>seq376
Length=1527771
Score = 113 bits (124), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 7/209 (3%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| |||||||| ||||| || | | |||
Sbjct 1196500 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 1196441
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || | ||||| |||| ||| || || |||||||| |||||
Sbjct 1196440 CCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1196381
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || ||| || || || || || ||||| ||| || || |||||
Sbjct 1196380 TTATCCTG-------GCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCCAGGGTG 1196328
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
| ||||| || || | || || |||||
Sbjct 1196327 ATGGTCTTCCCAGTAAGGGTCTTCACGAA 1196299
>seq5307
Length=1324
Score = 109 bits (120), Expect = 1e-18
Identities = 149/207 (72%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||||||||| || ||||| || || | ||||| | ||||| || |||||
Sbjct 932 GTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTCCAGCTG 873
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || || || || || || || ||||| || || ||||| || |||||||| |||||
Sbjct 872 TTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTT 813
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
||| | |||||||| ||||| ||| || || ||||| || | ||||| ||
Sbjct 812 AGCTTTGGCATTCTCAATAGTGTC---ACTGGGCTCGACCTCAAGTGTGATGGTCTTGCC 756
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| || || || || | |||||
Sbjct 755 CGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq717
Length=839118
Score = 109 bits (120), Expect = 1e-18
Identities = 149/207 (72%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||||||||| || ||||| | || | ||||| | ||||| || |||||
Sbjct 563466 GTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCCTCCAGCTG 563525
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| ||||| || || || | || ||||| || || ||||| || |||||||| |||||
Sbjct 563526 TTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTT 563585
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
||||| |||||||| ||||| ||| || || ||||| || | ||||| ||
Sbjct 563586 AGCTTTGACATTCTCAATAGTGTC---ACTGGGCTCGACCTCAAGTGTGATGGTCTTGCC 563642
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| || || || || | |||||
Sbjct 563643 CGTCAGGGTCTTCACAAAGATCTGCAT 563669
>seq647
Length=1105866
Score = 105 bits (116), Expect = 1e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 194940 AAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTT 194999
|||||||||||| |||||||| ||||| || | | ||| | |||||||| || |||||
Sbjct 850251 AAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTT 850192
Query 195000 ACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTG 195059
|| | ||||| |||| ||| || || |||||||| ||||| || || || || ||
Sbjct 850191 GCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGAC 850132
Query 195060 CTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119
||| || || || || || || || ||| | ||||| || || ||||| || || |
Sbjct 850131 CTTTACATTTTCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAG 850072
Query 195120 AGTTTTTACGAACACTTGCAT 195140
|||| | ||| | |||||
Sbjct 850071 CGTTTCCATGAAAATCTGCAT 850051
>seq71
Length=4921646
Score = 105 bits (116), Expect = 1e-17
Identities = 120/161 (75%), Gaps = 4/161 (2%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| |||||||| |||||| | | ||| |
Sbjct 1110215 AGTCTCAATACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAA----CCAAAGTACGT 1110270
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| ||||| || | ||| || || ||||| |||| ||| || || |||||||| |||||
Sbjct 1110271 CCCTCTTCCAGTTACTTGCCAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1110330
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083
|| | || || || ||| || || || || || |||||
Sbjct 1110331 TTATTCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGA 1110371
>seq298
Length=2265018
Score = 95.1 bits (104), Expect = 3e-14
Identities = 110/145 (76%), Gaps = 5/145 (3%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||||||||| || ||||| || || | ||||| | ||||| || |||||
Sbjct 584622 GTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAG--AGAGTGCGGCCATCCTCCAGCTG 584679
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || | || || || || || ||||| || || ||||| || |||||||| | ||
Sbjct 584680 TTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGA--TT 584737
Query 195057 TTGC-TTGACGTTCTCAATGGTGTC 195080
| || ||||| |||||||| |||||
Sbjct 584738 TAGCTTTGACATTCTCAATAGTGTC 584762
>seq45
Length=5545317
Score = 89.7 bits (98), Expect = 1e-12
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||||||||| || ||||| || || | ||||| ||||| || |||||
Sbjct 1737695 GTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCATCCTCCAGCTG 1737754
Query 194997 CT-TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055
| || | || || || | || ||||| || || ||||| || |||||||| ||||
Sbjct 1737755 TTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTT 1737814
Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115
| ||||| |||||| ||||||| | ||| || || || || | ||||| ||||
Sbjct 1737815 TAGCTTTGACATTCTCAGTGGTGTCAG-GCTT--GACCTCGAGTGTGATGGTCTTGCCTG 1737871
Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140
||| || || || || | |||||
Sbjct 1737872 TCAGGGTCTTCACAAAAATCTGCAT 1737896
>seq416
Length=1521731
Score = 86.0 bits (94), Expect = 1e-11
Identities = 152/220 (69%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| |||||||||||||||||||| | | |||| ||||| || | | ||| |
Sbjct 880270 AGTCTCAACACAAGGTGAAGAGTGGACTCCTGTGGAATGTTGTAGTCAGACAAAGTGCGT 880329
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| || | || || | || || ||| | |||| ||| || | |||||||| |||||
Sbjct 880330 CCCGCTGCCAGTTGTCTGCCAGCAAAGCTCAGTCTTTGCTGAACAGGAGGAATTCCTTCC 880389
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG--AACTTTCCACTTCAAGGG 195100
|| | || || || ||| | || || || ||| || | ||| || || || |
Sbjct 880390 TTAACCTGGATCTTGACCTTTCCATTTTC--TGTTGTACGCAAGGGTTCAACCTCGAGAG 880447
Query 195101 TAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || ||||| || | ||||| | ||| | ||||||
Sbjct 880448 TAATGGTTTTTCCAGTAAGGGTTTTCATGAAAATTTGCAT 880487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109373976470957
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