Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_016165.1 Length=39283 Score E Sequences producing significant alignments: (Bits) Value seq5790 311 2e-80 seq4482 141 2e-29 seq6021 86.0 2e-12 seq6827 82.4 2e-11 >seq5790 Length=1233 Score = 311 bits (344), Expect = 2e-80 Identities = 484/687 (70%), Gaps = 6/687 (1%) Strand=Plus/Plus Query 16944 GGGTCGGCACGGTGTTGCACTTCGACGCCGTTATCGTGCGCGCCGCGAAGGC-GCCCGGA 17002 ||||||| ||| | |||| |||||| || |||| ||||| | | ||| | |||| Sbjct 550 GGGTCGGAACGATCCTGCATCACGACGCGGTGCTCGTCCGCGC-GTGCAGGAAGAGCGGA 608 Query 17003 TGGCGCGTGACCGAGTTCCAGGCGGTGGTGAAGTTCCCCGACCGGATGGACCTGTGGGAC 17062 ||||| || || | || |||||| | || ||||||||||| |||||||| |||||||| Sbjct 609 TGGCGGGTCACAAAATTTCAGGCGATCGTCAAGTTCCCCGATCGGATGGATCTGTGGGAA 668 Query 17063 CGGTTCGAAGAGGTCTATCACAACGACGGCGAAGACGCGGCCAAGGCGTTTTACGAGGCG 17122 || ||||| |||| ||| ||| ||||| ||||| || || | ||| |||| Sbjct 669 CGTTTCGAGGAGGCCTACCACGCTGACGGTGAAGAGAGCGCACTGGATTACTACACGGCG 728 Query 17123 CGCAAGGCCGAGATGGATCAGGGCGCGGTGGTCAACTGGCCCTCGGTGCAGTCGCTGCTG 17182 |||| | |||||||| | ||||| || || ||||||| | |||||| |||| || Sbjct 729 AACAAGACTGAGATGGACCTCGGCGCAGTCGTGAACTGGCAGGCCGTGCAGCCGCTCGTG 788 Query 17183 TTCCTGATGCTGGAGCGCGCGGCCGACAAAGCCGCCTTCCAGACCGAATATCAGAACCAG 17242 |||||||| ||||| ||| | | | |||||| ||| ||||| |||||| Sbjct 789 CAGCTGATGCTTGAGCGTGCGATCTCGCACGATGCCTTCATGACGGAATACCAGAACAGC 848 Query 17243 CCGATCAGCGAGGGGAACCCGTTTGGC--GATCTGACCTATTGGGTGCAGCCGCTGCGGG 17300 |||||| | || |||||||| ||| ||||| | | ||||| || ||| |||| Sbjct 849 CCGATCGCGGCCGGTAACCCGTTCGGCAAGATCT--CGTTCTGGGTCGAGACGCGCCGGG 906 Query 17301 AATGGATCTTCTTCGGCGCGATCGACCCGAGCCTTGGCAAGGCTGGCAAGGGGCGCGACC 17360 | ||| ||||| |||||||| ||| || || ||| |||| | || |||| Sbjct 907 ATCTCGTCTATTTCGGGGCGATCGATCCGTCGCTCGGAAAGCGGAACAAGAGCCGTGACC 966 Query 17361 CGTCAGCAATCCTGATCGGCGGCTTCGACCGGCTGGCCGGGAAGCTTGATGTGGTCGAAG 17420 | || || ||||||||||| || | ||||||||| |||| ||| | || |||||||| | Sbjct 967 CATCCGCCATCCTGATCGGTGGGATGGACCGGCTGACCGGCAAGATGGACGTGGTCGAGG 1026 Query 17421 CCTCGATCCGCAAGCGCCTGCCCGATCTGATCATCGCCGACACGATCGCCCTGCAGCGCG 17480 | || |||||| || ||||| || |||||||||| || || ||||| || ||||| | Sbjct 1027 CATCAATCCGCCGCCGTCTGCCGGACATGATCATCGCGGATACCATCGCGCTTCAGCGAG 1086 Query 17481 AATATCGGGCGCTGATGTGGTTCGTTGAAACGGTTCAGTTTCAGGAGTTCCTGCGCACCG 17540 | |||||| || |||||||||| |||| | ||||| ||||| |||||| | ||| Sbjct 1087 AGTATCGGTGTCTCTTGTGGTTCGTGGAAAGCATCCAGTTCCAGGAATTCCTGAGGACCA 1146 Query 17541 AGCTGATGACGCGGGCCGCCCGCGATGGCGTTGGCATCTCGGCCGTGCCGATCACGCCCT 17600 ||||| | || ||| | ||||| || |||||||| ||||| | | ||| Sbjct 1147 CAATGATGCGGGATGCGGCCAAGCAAGGCGTCGGGATCTCGGCAGTGCCTGTGATGCCGA 1206 Query 17601 CGGCCGACAAGGACCTGCGCATCGAGC 17627 |||| |||||| |||| ||||||| Sbjct 1207 CGGCAGACAAGACATTGCGGATCGAGC 1233 Score = 282 bits (312), Expect = 1e-71 Identities = 368/506 (73%), Gaps = 10/506 (2%) Strand=Plus/Plus Query 16369 GGCCGACGGCTTCCAGTTCTTCATGGAAACCTACTTGCCCCACTATGTGAAGGGCGAGCA 16428 || ||||||||||| || |||||||| ||||| |||| |||||| | |||||| Sbjct 37 GGGCGACGGCTTCCGCTTTTTCATGGAGACCTATCTGCCGCACTATATTCGCGGCGAGGC 96 Query 16429 CAGCCTGTTCCACCAGCACATCTTCGCCCGGGTGCCGGAAATCCTCGCCTCTGAAAAGGG 16488 ||||||||||||| || || ||||||||||||||| | ||| | ||||| || ||||| Sbjct 97 CAGCCTGTTCCACGAGGCGATTTTCGCCCGGGTGCCGCAGATCATGGCCTCGGACAAGGG 156 Query 16489 CGTGCGGGATCTCTTCGTCGCGCCGCGCGGGGCCTCCAAATCGACG--TACCTGTCTCTG 16546 ||| || || |||||||||||||||||||| | || ||||| || || | | ||| Sbjct 157 CGTCCGCGACATCTTCGTCGCGCCGCGCGGGTCGTCGAAATCCACCCATATCAGCCTC-- 214 Query 16547 GGCTTCGCGCTTTACTGCATC---ATGCGCGGGCTCAAGCGCTACATCATCGAGGTCTGC 16603 ||| | | ||| ||| ||||| ||||| || | || | | || ||||||||||| Sbjct 215 GGCATGGTGCTGTACCGCATCGTCATGCG---GCACGCACGGTTCGTCGTCGAGGTCTGC 271 Query 16604 GACGTCTATGAACAGGCGGCGCTTTTGATCGAGGCGATCAAGGCCGAACTGACGACGAAC 16663 |||||| | || |||||||| ||||||||||| || |||||||| ||||| | ||| Sbjct 272 GACGTCGCCGCGCAAGCGGCGCTGTTGATCGAGGCCATTAAGGCCGAGCTGACCAACAAC 331 Query 16664 GTCCGGCTGCAGTGCGATTTTCCTGACGCATTCGGCCAGGGGCGCCTGTGGCGCGAGGGC 16723 ||||| | || ||||| || || || | |||| ||||||| | |||||||| ||| Sbjct 332 CCGCGGCTTCGGTCGGATTTCCCGGATGCGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGC 391 Query 16724 GAGATCGTCACGCGCAACAACATCCGCGTCGAAGGCCTGGGCGCCGCCAAGAAGATCCGT 16783 |||| | || || | |||| | || ||||| ||||||| | ||||| | || Sbjct 392 CAGATTATTACCCGTACCAACGTAATGATCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGC 451 Query 16784 GGCCGCCGTCATGGCCCGTATCGGCCCGATCTGCTGTTCCTGGACGACATCGAGAACGAC 16843 ||| || || || || || || ||||| || ||| || | |||||| | ||||||||| Sbjct 452 GGCTTGCGACACGGTCCATACCGACCCGACCTTCTGATCTTCGACGACCTGGAGAACGAC 511 Query 16844 GAACAGGTGCGCAGCCCCGAGCAGCG 16869 ||| || ||| || || ||||| Sbjct 512 GAAGCTGTCCGCGTGCCGGATCAGCG 537 >seq4482 Length=1618 Score = 141 bits (156), Expect = 2e-29 Identities = 294/421 (70%), Gaps = 29/421 (7%) Strand=Plus/Minus Query 2446 AAGTAGACGACGCGGCCGACGACGCGCAGTTGATCGACGGATTCGGCGCCGAAG-GTCTC 2504 || || || ||||||||||| |||||||| || || | | | | | ||||||| | ||| Sbjct 1400 AAATACACCACGCGGCCGACCACGCGCAGATGCTCAAGGTCTGCCG-GCCGAAGTGCCTC 1342 Query 2505 GACCGGATAGCCCTCGTCGGCATTGTCCGAGACGAGTTCGA-GACGACCGTCGAGGCGCC 2563 || |||||| | || |||||| || |||||||||| || | | ||| ||||| | Sbjct 1341 AACGGGATAGA-----TTGG-ATTGTCAGACACGAGTTCGACGAAG-CTGTCCAGGCGAC 1289 Query 2564 ATCTGGCGCGTTTGACCAGGAG--CCGGTCTGAGACGTTGAAGACGTAGATGCAGCCGTG 2621 || |||||||| || || || | |||| |||| ||| |||||||| ||||| Sbjct 1288 GTCGCAGCCGTTTGACAAGCAGATCCCCGCCGAGA--TTGACGACATAGATGCACCCGTG 1231 Query 2622 CTCGACTTCGCGCTGGCTGTGATCGACGACGAGAAGCGCGCCGTCCGGGATCGTCGGCTT 2681 | | ||| ||||||||| |||| || || | || ||||||||||| || || Sbjct 1230 AACCAGCTCGATCTGGCTGTGGTCGATCACCAGGATCGATCCGTCCGGGATGGTGGGAAC 1171 Query 2682 CATCGAGGTTCCACGCGCCCAGATGACCGAGCAGTGATCCGGTCTTGCGCCCTGGTTGGC 2741 ||| | ||| ||||||||||| || |||||||||||||| ||||| || | || Sbjct 1170 CATGCTGTCTCCGCGCGCCCAGATCACGGAGCAGTGATCCGGGGCGGCGCCAAGG-TCGC 1112 Query 2742 GAGGAAA-CGGCGGGTGAAGGCGACCACG-CCGTCGGCCTGTTCTGAGGCGGGCAC---C 2796 || |||| | ||| ||| |||| | | | ||| || |||| | | ||| Sbjct 1111 GAAGAAAGCCGCGCTCGAAAGCGATGATGTCTGTC-ACCAGTTC---GCTTGTCACATTG 1056 Query 2797 ATGCCCGACCCGGCCGAGGCGTGCACATCGTTGTAAACG-GGCAATCTGACGAAATCCGG 2855 ||||||| |||||||| || ||||| || | |||| ||||||| ||||||||| || Sbjct 1055 ATGCCCGCGCCGGCCGATGCCTGCACGTCAT----AACGCGGCAATCGGACGAAATCTGG 1000 Query 2856 T 2856 | Sbjct 999 T 999 >seq6021 Length=1200 Score = 86.0 bits (94), Expect = 2e-12 Identities = 131/180 (73%), Gaps = 5/180 (3%) Strand=Plus/Minus Query 27594 GGGCGCGCTGTCGATCGTGCACGGCACCACGGCGGGCAACATCGTCGAGATCACCGCCCC 27653 |||| |||| | ||| ||| |||||| | || ||||| ||| |||||||| || || Sbjct 267 GGGC-CGCTCGCCATCCAGCATGGCACCGCTGCCGGCAATATCATCGAGATCGATGCGCC 209 Query 27654 GGCCGTCGAGATCGGCAAGCCCGCGCAGGGCCAGACCGACAACGTCGCGAACTACAGCCT 27713 ||| || |||||||| ||| | || |||||||||||| ||| |||||||| || Sbjct 208 GGCGGTGGAGATCGGGGCGCCGACCATCGGGCAGACCGACAACATCGTCAACTACAGTCT 149 Query 27714 GCCGCTGCGGT-TCTGCCCGGTC-TCGGGCCGTGACGAAATCAAGATCATCGTGCGCTGA 27771 ||| || | ||||||||||| ||||| | ||||| ||| || | ||||||||| Sbjct 148 TGAGCT-CGATGTCTGCCCGGTCGACGGGCTG-GACGATCTCACCATTACTGTGCGCTGA 91 >seq6827 Length=1095 Score = 82.4 bits (90), Expect = 2e-11 Identities = 208/308 (68%), Gaps = 20/308 (6%) Strand=Plus/Plus Query 24551 CATGCTGGCGGCCTATTTCGAGGTGAAGCGCGTGCTGCTTGGCGCCGCGGTCTGGCTGCC 24610 ||||||| || ||||||||| ||| ||||| | |||| |||||||| ||||| Sbjct 50 CATGCTGTCGACCTATTTCGGGGTC---CGCGTCGTTGAAGGCGGCGCGGTCTACCTGCC 106 Query 24611 CGAAAACGCGACCGACGACAC-GAT--GGC-CAGCGATGTCTGGGGCGATGACGTGATCC 24666 ||| ||| || |||||| ||| ||| | || || ||||| || |||| ||||| Sbjct 107 CGAGGGCGC-ACT--CGACACTGATCCGGCTCTGCCC-GTGTGGGGGGACGACGCGATCC 162 Query 24667 TCTCCTATGTCCCCGA--TACCGGCGACA-------ACTTCCAGGTGCCCGCCTACGGCT 24717 | ||||||| || || |||||| | || || | | || |||||||||| Sbjct 163 TGGCCTATGTGCCGGAGGTACCGGAGGCAGAACAGGACATGGGCGAACCGGCCTACGGCT 222 Query 24718 ACACCTACGAACTGGCGGGCTATCCGCAGGTTCAGCAGCCCTACTTCGAGCGCAGCTGCG 24777 ||| ||| || |||| ||| ||||| ||| || ||| || | ||| || | | Sbjct 223 ACATCTATGAGCTGGAGGGGTATCCCACGGTCGAGACGCCTTATTACGACGACAACAGGA 282 Query 24778 ACAGCTGGATCTACCCGACCACGGTCGAGCGTCGGCCCTATCTGGTGGGCGCCGAAGGGG 24837 | |||||| || |||| || ||||| || || || || | || |||||||| || | Sbjct 283 AGTCCTGGATGTATCCGATGACCGTCGAACGGCGCCCTTACATCGTCGGCGCCGAGGGTG 342 Query 24838 GGTTCCTG 24845 | ||| || Sbjct 343 GCTTCTTG 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125572709291990