Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_016165.1
Length=39283
Score E
Sequences producing significant alignments: (Bits) Value
seq5790 311 2e-80
seq4482 141 2e-29
seq6021 86.0 2e-12
seq6827 82.4 2e-11
>seq5790
Length=1233
Score = 311 bits (344), Expect = 2e-80
Identities = 484/687 (70%), Gaps = 6/687 (1%)
Strand=Plus/Plus
Query 16944 GGGTCGGCACGGTGTTGCACTTCGACGCCGTTATCGTGCGCGCCGCGAAGGC-GCCCGGA 17002
||||||| ||| | |||| |||||| || |||| ||||| | | ||| | ||||
Sbjct 550 GGGTCGGAACGATCCTGCATCACGACGCGGTGCTCGTCCGCGC-GTGCAGGAAGAGCGGA 608
Query 17003 TGGCGCGTGACCGAGTTCCAGGCGGTGGTGAAGTTCCCCGACCGGATGGACCTGTGGGAC 17062
||||| || || | || |||||| | || ||||||||||| |||||||| ||||||||
Sbjct 609 TGGCGGGTCACAAAATTTCAGGCGATCGTCAAGTTCCCCGATCGGATGGATCTGTGGGAA 668
Query 17063 CGGTTCGAAGAGGTCTATCACAACGACGGCGAAGACGCGGCCAAGGCGTTTTACGAGGCG 17122
|| ||||| |||| ||| ||| ||||| ||||| || || | ||| ||||
Sbjct 669 CGTTTCGAGGAGGCCTACCACGCTGACGGTGAAGAGAGCGCACTGGATTACTACACGGCG 728
Query 17123 CGCAAGGCCGAGATGGATCAGGGCGCGGTGGTCAACTGGCCCTCGGTGCAGTCGCTGCTG 17182
|||| | |||||||| | ||||| || || ||||||| | |||||| |||| ||
Sbjct 729 AACAAGACTGAGATGGACCTCGGCGCAGTCGTGAACTGGCAGGCCGTGCAGCCGCTCGTG 788
Query 17183 TTCCTGATGCTGGAGCGCGCGGCCGACAAAGCCGCCTTCCAGACCGAATATCAGAACCAG 17242
|||||||| ||||| ||| | | | |||||| ||| ||||| ||||||
Sbjct 789 CAGCTGATGCTTGAGCGTGCGATCTCGCACGATGCCTTCATGACGGAATACCAGAACAGC 848
Query 17243 CCGATCAGCGAGGGGAACCCGTTTGGC--GATCTGACCTATTGGGTGCAGCCGCTGCGGG 17300
|||||| | || |||||||| ||| ||||| | | ||||| || ||| ||||
Sbjct 849 CCGATCGCGGCCGGTAACCCGTTCGGCAAGATCT--CGTTCTGGGTCGAGACGCGCCGGG 906
Query 17301 AATGGATCTTCTTCGGCGCGATCGACCCGAGCCTTGGCAAGGCTGGCAAGGGGCGCGACC 17360
| ||| ||||| |||||||| ||| || || ||| |||| | || ||||
Sbjct 907 ATCTCGTCTATTTCGGGGCGATCGATCCGTCGCTCGGAAAGCGGAACAAGAGCCGTGACC 966
Query 17361 CGTCAGCAATCCTGATCGGCGGCTTCGACCGGCTGGCCGGGAAGCTTGATGTGGTCGAAG 17420
| || || ||||||||||| || | ||||||||| |||| ||| | || |||||||| |
Sbjct 967 CATCCGCCATCCTGATCGGTGGGATGGACCGGCTGACCGGCAAGATGGACGTGGTCGAGG 1026
Query 17421 CCTCGATCCGCAAGCGCCTGCCCGATCTGATCATCGCCGACACGATCGCCCTGCAGCGCG 17480
| || |||||| || ||||| || |||||||||| || || ||||| || ||||| |
Sbjct 1027 CATCAATCCGCCGCCGTCTGCCGGACATGATCATCGCGGATACCATCGCGCTTCAGCGAG 1086
Query 17481 AATATCGGGCGCTGATGTGGTTCGTTGAAACGGTTCAGTTTCAGGAGTTCCTGCGCACCG 17540
| |||||| || |||||||||| |||| | ||||| ||||| |||||| | |||
Sbjct 1087 AGTATCGGTGTCTCTTGTGGTTCGTGGAAAGCATCCAGTTCCAGGAATTCCTGAGGACCA 1146
Query 17541 AGCTGATGACGCGGGCCGCCCGCGATGGCGTTGGCATCTCGGCCGTGCCGATCACGCCCT 17600
||||| | || ||| | ||||| || |||||||| ||||| | | |||
Sbjct 1147 CAATGATGCGGGATGCGGCCAAGCAAGGCGTCGGGATCTCGGCAGTGCCTGTGATGCCGA 1206
Query 17601 CGGCCGACAAGGACCTGCGCATCGAGC 17627
|||| |||||| |||| |||||||
Sbjct 1207 CGGCAGACAAGACATTGCGGATCGAGC 1233
Score = 282 bits (312), Expect = 1e-71
Identities = 368/506 (73%), Gaps = 10/506 (2%)
Strand=Plus/Plus
Query 16369 GGCCGACGGCTTCCAGTTCTTCATGGAAACCTACTTGCCCCACTATGTGAAGGGCGAGCA 16428
|| ||||||||||| || |||||||| ||||| |||| |||||| | ||||||
Sbjct 37 GGGCGACGGCTTCCGCTTTTTCATGGAGACCTATCTGCCGCACTATATTCGCGGCGAGGC 96
Query 16429 CAGCCTGTTCCACCAGCACATCTTCGCCCGGGTGCCGGAAATCCTCGCCTCTGAAAAGGG 16488
||||||||||||| || || ||||||||||||||| | ||| | ||||| || |||||
Sbjct 97 CAGCCTGTTCCACGAGGCGATTTTCGCCCGGGTGCCGCAGATCATGGCCTCGGACAAGGG 156
Query 16489 CGTGCGGGATCTCTTCGTCGCGCCGCGCGGGGCCTCCAAATCGACG--TACCTGTCTCTG 16546
||| || || |||||||||||||||||||| | || ||||| || || | | |||
Sbjct 157 CGTCCGCGACATCTTCGTCGCGCCGCGCGGGTCGTCGAAATCCACCCATATCAGCCTC-- 214
Query 16547 GGCTTCGCGCTTTACTGCATC---ATGCGCGGGCTCAAGCGCTACATCATCGAGGTCTGC 16603
||| | | ||| ||| ||||| ||||| || | || | | || |||||||||||
Sbjct 215 GGCATGGTGCTGTACCGCATCGTCATGCG---GCACGCACGGTTCGTCGTCGAGGTCTGC 271
Query 16604 GACGTCTATGAACAGGCGGCGCTTTTGATCGAGGCGATCAAGGCCGAACTGACGACGAAC 16663
|||||| | || |||||||| ||||||||||| || |||||||| ||||| | |||
Sbjct 272 GACGTCGCCGCGCAAGCGGCGCTGTTGATCGAGGCCATTAAGGCCGAGCTGACCAACAAC 331
Query 16664 GTCCGGCTGCAGTGCGATTTTCCTGACGCATTCGGCCAGGGGCGCCTGTGGCGCGAGGGC 16723
||||| | || ||||| || || || | |||| ||||||| | |||||||| |||
Sbjct 332 CCGCGGCTTCGGTCGGATTTCCCGGATGCGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGC 391
Query 16724 GAGATCGTCACGCGCAACAACATCCGCGTCGAAGGCCTGGGCGCCGCCAAGAAGATCCGT 16783
|||| | || || | |||| | || ||||| ||||||| | ||||| | ||
Sbjct 392 CAGATTATTACCCGTACCAACGTAATGATCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGC 451
Query 16784 GGCCGCCGTCATGGCCCGTATCGGCCCGATCTGCTGTTCCTGGACGACATCGAGAACGAC 16843
||| || || || || || || ||||| || ||| || | |||||| | |||||||||
Sbjct 452 GGCTTGCGACACGGTCCATACCGACCCGACCTTCTGATCTTCGACGACCTGGAGAACGAC 511
Query 16844 GAACAGGTGCGCAGCCCCGAGCAGCG 16869
||| || ||| || || |||||
Sbjct 512 GAAGCTGTCCGCGTGCCGGATCAGCG 537
>seq4482
Length=1618
Score = 141 bits (156), Expect = 2e-29
Identities = 294/421 (70%), Gaps = 29/421 (7%)
Strand=Plus/Minus
Query 2446 AAGTAGACGACGCGGCCGACGACGCGCAGTTGATCGACGGATTCGGCGCCGAAG-GTCTC 2504
|| || || ||||||||||| |||||||| || || | | | | | ||||||| | |||
Sbjct 1400 AAATACACCACGCGGCCGACCACGCGCAGATGCTCAAGGTCTGCCG-GCCGAAGTGCCTC 1342
Query 2505 GACCGGATAGCCCTCGTCGGCATTGTCCGAGACGAGTTCGA-GACGACCGTCGAGGCGCC 2563
|| |||||| | || |||||| || |||||||||| || | | ||| ||||| |
Sbjct 1341 AACGGGATAGA-----TTGG-ATTGTCAGACACGAGTTCGACGAAG-CTGTCCAGGCGAC 1289
Query 2564 ATCTGGCGCGTTTGACCAGGAG--CCGGTCTGAGACGTTGAAGACGTAGATGCAGCCGTG 2621
|| |||||||| || || || | |||| |||| ||| |||||||| |||||
Sbjct 1288 GTCGCAGCCGTTTGACAAGCAGATCCCCGCCGAGA--TTGACGACATAGATGCACCCGTG 1231
Query 2622 CTCGACTTCGCGCTGGCTGTGATCGACGACGAGAAGCGCGCCGTCCGGGATCGTCGGCTT 2681
| | ||| ||||||||| |||| || || | || ||||||||||| || ||
Sbjct 1230 AACCAGCTCGATCTGGCTGTGGTCGATCACCAGGATCGATCCGTCCGGGATGGTGGGAAC 1171
Query 2682 CATCGAGGTTCCACGCGCCCAGATGACCGAGCAGTGATCCGGTCTTGCGCCCTGGTTGGC 2741
||| | ||| ||||||||||| || |||||||||||||| ||||| || | ||
Sbjct 1170 CATGCTGTCTCCGCGCGCCCAGATCACGGAGCAGTGATCCGGGGCGGCGCCAAGG-TCGC 1112
Query 2742 GAGGAAA-CGGCGGGTGAAGGCGACCACG-CCGTCGGCCTGTTCTGAGGCGGGCAC---C 2796
|| |||| | ||| ||| |||| | | | ||| || |||| | | |||
Sbjct 1111 GAAGAAAGCCGCGCTCGAAAGCGATGATGTCTGTC-ACCAGTTC---GCTTGTCACATTG 1056
Query 2797 ATGCCCGACCCGGCCGAGGCGTGCACATCGTTGTAAACG-GGCAATCTGACGAAATCCGG 2855
||||||| |||||||| || ||||| || | |||| ||||||| ||||||||| ||
Sbjct 1055 ATGCCCGCGCCGGCCGATGCCTGCACGTCAT----AACGCGGCAATCGGACGAAATCTGG 1000
Query 2856 T 2856
|
Sbjct 999 T 999
>seq6021
Length=1200
Score = 86.0 bits (94), Expect = 2e-12
Identities = 131/180 (73%), Gaps = 5/180 (3%)
Strand=Plus/Minus
Query 27594 GGGCGCGCTGTCGATCGTGCACGGCACCACGGCGGGCAACATCGTCGAGATCACCGCCCC 27653
|||| |||| | ||| ||| |||||| | || ||||| ||| |||||||| || ||
Sbjct 267 GGGC-CGCTCGCCATCCAGCATGGCACCGCTGCCGGCAATATCATCGAGATCGATGCGCC 209
Query 27654 GGCCGTCGAGATCGGCAAGCCCGCGCAGGGCCAGACCGACAACGTCGCGAACTACAGCCT 27713
||| || |||||||| ||| | || |||||||||||| ||| |||||||| ||
Sbjct 208 GGCGGTGGAGATCGGGGCGCCGACCATCGGGCAGACCGACAACATCGTCAACTACAGTCT 149
Query 27714 GCCGCTGCGGT-TCTGCCCGGTC-TCGGGCCGTGACGAAATCAAGATCATCGTGCGCTGA 27771
||| || | ||||||||||| ||||| | ||||| ||| || | |||||||||
Sbjct 148 TGAGCT-CGATGTCTGCCCGGTCGACGGGCTG-GACGATCTCACCATTACTGTGCGCTGA 91
>seq6827
Length=1095
Score = 82.4 bits (90), Expect = 2e-11
Identities = 208/308 (68%), Gaps = 20/308 (6%)
Strand=Plus/Plus
Query 24551 CATGCTGGCGGCCTATTTCGAGGTGAAGCGCGTGCTGCTTGGCGCCGCGGTCTGGCTGCC 24610
||||||| || ||||||||| ||| ||||| | |||| |||||||| |||||
Sbjct 50 CATGCTGTCGACCTATTTCGGGGTC---CGCGTCGTTGAAGGCGGCGCGGTCTACCTGCC 106
Query 24611 CGAAAACGCGACCGACGACAC-GAT--GGC-CAGCGATGTCTGGGGCGATGACGTGATCC 24666
||| ||| || |||||| ||| ||| | || || ||||| || |||| |||||
Sbjct 107 CGAGGGCGC-ACT--CGACACTGATCCGGCTCTGCCC-GTGTGGGGGGACGACGCGATCC 162
Query 24667 TCTCCTATGTCCCCGA--TACCGGCGACA-------ACTTCCAGGTGCCCGCCTACGGCT 24717
| ||||||| || || |||||| | || || | | || ||||||||||
Sbjct 163 TGGCCTATGTGCCGGAGGTACCGGAGGCAGAACAGGACATGGGCGAACCGGCCTACGGCT 222
Query 24718 ACACCTACGAACTGGCGGGCTATCCGCAGGTTCAGCAGCCCTACTTCGAGCGCAGCTGCG 24777
||| ||| || |||| ||| ||||| ||| || ||| || | ||| || | |
Sbjct 223 ACATCTATGAGCTGGAGGGGTATCCCACGGTCGAGACGCCTTATTACGACGACAACAGGA 282
Query 24778 ACAGCTGGATCTACCCGACCACGGTCGAGCGTCGGCCCTATCTGGTGGGCGCCGAAGGGG 24837
| |||||| || |||| || ||||| || || || || | || |||||||| || |
Sbjct 283 AGTCCTGGATGTATCCGATGACCGTCGAACGGCGCCCTTACATCGTCGGCGCCGAGGGTG 342
Query 24838 GGTTCCTG 24845
| ||| ||
Sbjct 343 GCTTCTTG 350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125572709291990
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