Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_016448.1
Length=196691
Score E
Sequences producing significant alignments: (Bits) Value
seq135 116 5e-21
seq325 109 7e-19
>seq135
Length=3792752
Score = 116 bits (128), Expect = 5e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 2207 ACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGAT 2266
||||| |||| | || || |||| | | ||||| ||| ||||| | ||| |||||
Sbjct 595615 ACTGAGGAACTTACACGTTGCCAATTATACGCAACTCTCTGAGAATGACACCTGTGAGAT 595556
Query 2267 CCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTT 2326
||| |||||||| ||||| ||| |||| |||||| | |||| || | ||| ||| ||
Sbjct 595555 CCACCTGACCTGCTCTGTGGAGAATCCAAATGACCATGTCTCATTGAGGTGGCAGGTCTC 595496
Query 2327 GGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCAG 2386
|| || | |||||| || | |||||||| | |||||||||||| | || |||
Sbjct 595495 AGGAAACATACTTCTAGAGGAAGCAAACCTCACAATCTCCTGGGACCCTAAGACTTCCAG 595436
Query 2387 TGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTC 2438
||| |||| ||| ||||| || || || |||| |||||| | || |||
Sbjct 595435 TGAACAGACCTATTTCTGCATAGCTGAGAATCCTGTCAGCAATTTATCCTTC 595384
>seq325
Length=1976410
Score = 109 bits (120), Expect = 7e-19
Identities = 104/132 (79%), Gaps = 1/132 (1%)
Strand=Plus/Minus
Query 1884 CAAACCAGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGAGTCCGTAACACTGCCC 1943
||||||||||| | ||| ||||| || ||||||||||| |||||||| ||||| || |||
Sbjct 1584643 CAAACCAGCTCAAACCCACTGATGGTAAATGGGGTGCT-GGGGAGTCGGTAACGCTTCCC 1584585
Query 1944 CTGGAATTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGCACTACAACGGCACCTCC 2003
||||| || || || || || |||||| |||||| | |||||| ||||| | || ||
Sbjct 1584584 CTGGAGTTCCCTGCTGGGGACAAGATCCAGTCCAGCCCCTGGCTTCACAACAGAACATCT 1584525
Query 2004 ATCGCCTTTATT 2015
|| |||| |||
Sbjct 1584524 GTCACCTTCATT 1584513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629223646211160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |