Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq927 282 5e-71
seq861 107 2e-18
seq1 82.4 9e-11
>seq927
Length=612318
Score = 282 bits (312), Expect = 5e-71
Identities = 611/898 (68%), Gaps = 21/898 (2%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930
||| ||||| ||| | ||||| ||||| |||| |||| || || || || ||||| ||||
Sbjct 153610 CATCACTCCTATTCTCTGATACTCTCCTACTC-TCTTCTCAAAGAAGTTAGTCTTCCCTT 153668
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTAT--ATATAGTACTACA 36988
| ||||| ||||| ||||| || |||||||| || | || | | | || | ||| |
Sbjct 153669 CCAGTGAAATATTCTCCATGAAGTCAAATGGGTTT--TCTACTCTGAAAATCTTGCTAAA 153726
Query 36989 TGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTA--GTTCA 37046
| ||| || ||| || || || |||||||| ||| | | ||||| || ||
Sbjct 153727 ACCCAGCTCCAGCATAAGTCTGTCTGCCACAAATTCAATGCACTGCTTCATTAAAGTGCA 153786
Query 37047 TAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTAT 37105
|| || ||||| || || || || | ||| ||| ||| ||| | | || |||| |
Sbjct 153787 A--TTCATCCCAATGAGCTTCACCGGCAATGCCTCTGTGAGGAACTCCTGTT-CTATCCT 153843
Query 37106 TACAGCATCTTTAACTATATTAACAATAACTT-CT--TCAGTTGGGGGATATTTTAAATA 37162
|||||||| || ||| | | | |||| || || | || | | | | |
Sbjct 153844 TACAGCATTGACAATTATTT---CTTTGACTTTCTGCTCCGAAGGTTTGTGTATCAGGTG 153900
Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222
||| |||| | || ||||| ||||| |||||||| |||||||| || || | ||| ||
Sbjct 153901 TTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTT 153960
Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282
||||| || | || | ||| | |||| ||| || | ||| ||||| | |||||||||
Sbjct 153961 GGAAAATGTGAGGCCAGACATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGA 154020
Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA 37342
||||||||||| || ||||| ||||| ||||| ||||||| |||| || | || |
Sbjct 154021 ACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGC 154080
Query 37343 ACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGT 37402
| || |||||| | |||||||||||| || ||||| |||||
Sbjct 154081 CTCTTTGTCCCCAATCCAACGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGT 154140
Query 37403 TTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAG 37462
||||| || || |||||| | | |||| | |||| | ||||| || ||| | ||
Sbjct 154141 CTCAATGGCGTTGAAGAGACACTCCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAG 154200
Query 37463 TAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCT 37522
| ||||||||| ||||| || | ||| || | || || || || ||||| ||||| |
Sbjct 154201 GAGACTATACATCTCAGAATGTTTGTTTCCA-TGGCAATTTGGAAGCCATAGAAACAGCG 154259
Query 37523 AGCTTCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCC 37581
||||| | |||| |||| || | ||||| || | ||||||||||| ||||| |
Sbjct 154260 GGCTTCTG-TAATCTGAATTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTGACTATGC 154318
Query 37582 CATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATA 37641
||||||| || ||||||||||||||||||| |||||||| ||| |||||| |
Sbjct 154319 CATCACTCGCAGCAAAGAAAGCAAGAACATGGGATATAAAATATCTCTCATCAGGCTTCA 154378
Query 37642 ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTG 37701
|| ||| | | | || || || | ||| ||||| ||| | |||||||| |
Sbjct 154379 GGGCTTCCCAGTGCTGGAGGTCCTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAG 154438
Query 37702 CCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759
|| || ||||||||| ||||||||||| | || || ||||| | |||||
Sbjct 154439 CCTCCGCTTTCTTATACATCTGCCAAATATCATGGTATTCGATAGGAAAGACGACAAA 154496
>seq861
Length=819057
Score = 107 bits (118), Expect = 2e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257
|||||||||| || || | |||||| ||||| || | ||| ||||| | ||||||||| |
Sbjct 774704 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCT 774645
Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317
| | ||| ||||| || ||||||||||| || ||||||| ||||| || || ||||| |
Sbjct 774644 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 774585
Query 37318 CTAC 37321
| ||
Sbjct 774584 CCAC 774581
>seq1
Length=12387654
Score = 82.4 bits (90), Expect = 9e-11
Identities = 180/270 (67%), Gaps = 0/270 (0%)
Strand=Plus/Minus
Query 34825 TTCAAAAATTATCTGCGCAACTCTTTCACCCTTTGAAATATAAAATGTTGATTCTCCATT 34884
|||| |||| | ||| |||| || ||||||||| | | ||| || || |||
Sbjct 7595492 TTCACAAATGAGCTGTGCAATTCGGTCACCCTTTTTGACTTCAAACTTTTCTTTGCCAAA 7595433
Query 34885 ATTAATTACGATAATACCAATATTACCTCTGTAATCCCTATCTATAACACCTCCACCTAT 34944
||||| | | || ||||||||| ||||||||||| |||||| ||||| | |||||
Sbjct 7595432 ATTAAACAGTACAACACCAATATTTCCTCTGTAATCTTCATCTATGACACCAGCTCCTAT 7595373
Query 34945 ATCAATGTATTTATTCAAAGACAAACCTGATCTTGCAGCTATCCTACCATAACATCCTTC 35004
||||||| | | || || ||| || || | || | ||| || ||||| || ||
Sbjct 7595372 ATCAATGAAATATTTTGCAGCCAAGCCAGAACATGGAACTACTCTTCCATAGCACCCAGA 7595313
Query 35005 TGGTATATCAAACATAATATCTGTTTTCACTAGTATTCTTTTTAGTGGGCTTATTTCATA 35064
|| | | | | | ||| || |||||||||| ||| | | | || || | ||
Sbjct 7595312 AGGAAGAGCCATCTGAATGTCGGTTTTCACTACGATTTTCTCCATAGGTGGTAATGTGTA 7595253
Query 35065 ATCGTATGCACTATAAAGATCAAACCCAGC 35094
||| || ||||| || || ||| | || ||
Sbjct 7595252 ATCATAGGCACTGTACAGGTCATAGCCCGC 7595223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592260744618840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |