Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_018274.1
Length=36847
Score E
Sequences producing significant alignments: (Bits) Value
seq5790 116 9e-22
>seq5790
Length=1233
Score = 116 bits (128), Expect = 9e-22
Identities = 139/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 14828 AGCCGCGACCCCAGCGCCATCCTGGTGGGTGGGTTCAACCGGGAGACAGGCGTCCTGGAC 14887
||||| ||||| |||||||||| | |||||| | ||||| ||| ||| |||||
Sbjct 957 AGCCGTGACCCATCCGCCATCCTGATCGGTGGGATGGACCGGCTGACCGGCAAGATGGAC 1016
Query 14888 GTGGTCGAGGCCGCCATCCGCAAACGCCTGCCGGACAAGATCATCGAGGACGTCATCGCC 14947
||||||||||| | |||||| || |||||||||| |||||||| ||| ||||||
Sbjct 1017 GTGGTCGAGGCATCAATCCGCCGCCGTCTGCCGGACATGATCATCGCGGATACCATCGCG 1076
Query 14948 ATGCAGCGGGCCTATCACTGCCTGGTGTGGGGCGTTGAGGCGGTCCAGTTCCAGGAGTTC 15007
| ||||| | |||| || || ||||| ||| || ||||||||||||| |||
Sbjct 1077 CTTCAGCGAGAGTATCGGTGTCTCTTGTGGTTCGTGGAAAGCATCCAGTTCCAGGAATTC 1136
Query 15008 CTGCGCACC 15016
||| | |||
Sbjct 1137 CTGAGGACC 1145
Score = 98.7 bits (108), Expect = 2e-16
Identities = 173/250 (69%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 14096 GAAGCGATCAAGGCGGAGCTGGAGTTCAACCCGCGCCT--GGCCATGGACTTCCCCCAGG 14153
|| || || ||||| |||||| ||||||||| || || | ||| ||||| | |
Sbjct 302 GAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTTCGGTC--GGATTTCCCGGATG 359
Query 14154 GCGCCGGCAAGGGCCGCGTCTGGCAAGTCGGCACCATCGTTACGGCGAACGATGCCAAGG 14213
||||||||| || ||||||| | ||| || |||| | | | | | |
Sbjct 360 CGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTATTACCCGTACCAACGTAATGA 419
Query 14214 TCCAGGTCTTCGGCTCCGGCAAGCGGATGCGCGGTCTTCGACACGGCCCGCATCGTCCTG 14273
||| || | ||||| ||||| || | ||||||| | |||||||| || | || || |
Sbjct 420 TCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCGACACGGTCCATACCGACCCG 479
Query 14274 ACCTGGTGATCGGCGACGACCTGGAGAACGACGAGAACGTCCGCAGCCCGGAGCAGCGCG 14333
|||| ||||| ||||||||||||||||||||| |||||| ||||| ||||| |
Sbjct 480 ACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGTCCGCGTGCCGGATCAGCGGG 539
Query 14334 ACAAGCTGGA 14343
|||| ||||
Sbjct 540 ACAAATTGGA 549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117778210124318
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |