Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_018274.1 Length=36847 Score E Sequences producing significant alignments: (Bits) Value seq5790 116 9e-22 >seq5790 Length=1233 Score = 116 bits (128), Expect = 9e-22 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 14828 AGCCGCGACCCCAGCGCCATCCTGGTGGGTGGGTTCAACCGGGAGACAGGCGTCCTGGAC 14887 ||||| ||||| |||||||||| | |||||| | ||||| ||| ||| ||||| Sbjct 957 AGCCGTGACCCATCCGCCATCCTGATCGGTGGGATGGACCGGCTGACCGGCAAGATGGAC 1016 Query 14888 GTGGTCGAGGCCGCCATCCGCAAACGCCTGCCGGACAAGATCATCGAGGACGTCATCGCC 14947 ||||||||||| | |||||| || |||||||||| |||||||| ||| |||||| Sbjct 1017 GTGGTCGAGGCATCAATCCGCCGCCGTCTGCCGGACATGATCATCGCGGATACCATCGCG 1076 Query 14948 ATGCAGCGGGCCTATCACTGCCTGGTGTGGGGCGTTGAGGCGGTCCAGTTCCAGGAGTTC 15007 | ||||| | |||| || || ||||| ||| || ||||||||||||| ||| Sbjct 1077 CTTCAGCGAGAGTATCGGTGTCTCTTGTGGTTCGTGGAAAGCATCCAGTTCCAGGAATTC 1136 Query 15008 CTGCGCACC 15016 ||| | ||| Sbjct 1137 CTGAGGACC 1145 Score = 98.7 bits (108), Expect = 2e-16 Identities = 173/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 14096 GAAGCGATCAAGGCGGAGCTGGAGTTCAACCCGCGCCT--GGCCATGGACTTCCCCCAGG 14153 || || || ||||| |||||| ||||||||| || || | ||| ||||| | | Sbjct 302 GAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTTCGGTC--GGATTTCCCGGATG 359 Query 14154 GCGCCGGCAAGGGCCGCGTCTGGCAAGTCGGCACCATCGTTACGGCGAACGATGCCAAGG 14213 ||||||||| || ||||||| | ||| || |||| | | | | | | Sbjct 360 CGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTATTACCCGTACCAACGTAATGA 419 Query 14214 TCCAGGTCTTCGGCTCCGGCAAGCGGATGCGCGGTCTTCGACACGGCCCGCATCGTCCTG 14273 ||| || | ||||| ||||| || | ||||||| | |||||||| || | || || | Sbjct 420 TCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCGACACGGTCCATACCGACCCG 479 Query 14274 ACCTGGTGATCGGCGACGACCTGGAGAACGACGAGAACGTCCGCAGCCCGGAGCAGCGCG 14333 |||| ||||| ||||||||||||||||||||| |||||| ||||| ||||| | Sbjct 480 ACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGTCCGCGTGCCGGATCAGCGGG 539 Query 14334 ACAAGCTGGA 14343 |||| |||| Sbjct 540 ACAAATTGGA 549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117778210124318