Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq927 201 2e-46
seq418 172 1e-37
seq65 132 9e-26
seq636 96.9 6e-15
seq558 89.7 1e-12
>seq927
Length=612318
Score = 201 bits (222), Expect = 2e-46
Identities = 561/848 (66%), Gaps = 26/848 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||| || || || ||||| |||||||||||||| |||||||| |||| || || |||||
Sbjct 153625 CTGATACTCTCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 153684
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTAT-ACACCCGTG-TCAGGCCCATCTGTTCCAGC 47956
||||||| || ||||| | | | | | | | || | | |||| || |||||
Sbjct 153685 CATGAAGTCAAATGGGTTT--TCTACTCTGAAAATCTTGCTAAAACCCAGCT---CCAGC 153739
Query 47957 AGGTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013
| | || || || | || ||| | | ||| | ||| ||||| || |||
Sbjct 153740 ATAAGTCTGTCTGCCACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCATCCCAATG 153799
Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073
|| ||| ||||| |||| |||||| ||||||| |||||| || || | | |
Sbjct 153800 AGCTTCACCGGCAATGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCATTGACAATT 153859
Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
|| | || || ||| || ||||||| |||||| ||| | | || ||||
Sbjct 153860 ATTTCTTTGACTTTCTGCTCCGAAGGTTTGTGTATCAGGTGTTTGA---ACATCAGGCAG 153916
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|||||||| | ||| || || || || | ||| || || ||||||| || ||| |||
Sbjct 153917 GCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCA 153976
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
| ||| | || | | ||||||||||| || | || ||||| ||||| ||||||||
Sbjct 153977 GACATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATT 154036
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
|| |||||||| || || || | | ||||| | | ||| | ||||| |||
Sbjct 154037 CCTTCCACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATC 154096
Query 48314 C-AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372
| | | ||| ||||| |||||||||||||||| || ||||| ||||| ||||| |||
Sbjct 154097 CAACGCAAG-GCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTGAA 154155
Query 48373 GAGCTTCTTGCACTCACCT--GCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTAC 48427
||| || | || ||| | || || ||| || | |||| || | |||
Sbjct 154156 GAGACACT--CCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACT---ATAC 154210
Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487
|||||||| || || || || || || ||||| || ||||| | ||| ||
Sbjct 154211 ATCTCAGAATGTTTGTT-TCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTA 154269
Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547
| ||| | |||| | || | ||||| || || ||||||||||| ||||| |||
Sbjct 154270 ATCTGAATTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCA 154329
Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAG 48607
|||||||| ||||| ||||| | |||| | ||| | | | || || | ||||
Sbjct 154330 GCAAAGAAAGCAAGAACATGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAG 154389
Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTT 48667
||| | ||| ||| || |||||||| || | ||||| ||||| || |||||
Sbjct 154390 TGCTGGAGGTCCTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTC 154449
Query 48668 TTGTACAT 48675
|| |||||
Sbjct 154450 TTATACAT 154457
>seq418
Length=1683594
Score = 172 bits (190), Expect = 1e-37
Identities = 184/243 (76%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 241385 AGCTGCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGG 241444
||| |||| ||||| | || | ||| || ||||| ||||||||| |||||||||||
Sbjct 274863 AGCAGCTGGCAGCCGTTGCTGACGTGAGTCATGACCTTCTGTTTGAGCTGGGCCACCTGC 274804
Query 241445 TCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACT 241504
||||| || | | || || | || || |||||||| || | ||||| ||||||
Sbjct 274803 TCCCGGAGGAGGCCGGCAGTGCTCGAGAGCCCTGCGTTCTCCGCTTTGAGTGTCTTCACC 274744
Query 241505 TTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAG 241564
|| ||||| || ||||||||||| ||||| || ||| ||||| |||||||| ||||
Sbjct 274743 TTGTCCTCTAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCAGC 274684
Query 241565 CGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624
|||||||| || | ||| || ||| | |||||||| |||||||| ||||||| ||| ||
Sbjct 274683 CGGTTCCGCAGCCGCTTGCGCTCCACTTTGATGCGCTCCTGGTCTTCCATGTTGATGGGG 274624
Query 241625 GAC 241627
|||
Sbjct 274623 GAC 274621
>seq65
Length=5215179
Score = 132 bits (146), Expect = 9e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||||| ||| ||||| || |||||||| || ||||| | | ||| || | |||
Sbjct 1701222 AGGACCTTCTGCTTGAGCTGCGCCACCTGCTCGCGCAGCAGGCTCGCCGTGGACGCCAGC 1701281
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | ||||||| ||||||||||||||| || |||| |||||| |||||
Sbjct 1701282 TCCGTGTTCTGGCTCTTGAGCGTCTTCACTTTCTCCTCGAGGCGCGAGATGCGCTCCAGC 1701341
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|||||| |||||| |||| || || | |||||| || || | ||| || || ||||||
Sbjct 1701342 TTGCGCTTGCGGCACTTGGAAGCAGCTATGCGGTTGCGCAGCCGCTTGCGCTCTGCCTTG 1701401
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627
||||| || || |||||||| || || |||
Sbjct 1701402 ATGCGCTCTTGCGTGTCCATGTCTATAGGCGAC 1701434
>seq636
Length=1077480
Score = 96.9 bits (106), Expect = 6e-15
Identities = 98/125 (78%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 213527 TGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTG 213586
||| ||||| | || || |||||||||||||||||| ||| || ||||||||||| ||
Sbjct 900622 TGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTG 900563
Query 213587 GTTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCT 213645
| ||| ||| || | || ||||| |||||||||||||| |||| || |||||| ||
Sbjct 900562 G-TTGCTTTTCCGGTTACAGGAATCTTTGTAGAGCATGTATGGGGTACCTGTCTCTGTCT 900504
Query 213646 GGGAC 213650
| |||
Sbjct 900503 GAGAC 900499
>seq558
Length=1220228
Score = 89.7 bits (98), Expect = 1e-12
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558
|||||||| ||||||||||| ||||| | ||||| || | ||||| |||| |||
Sbjct 156136 TTCACTTTTTCCTCCAGCCGGGCGATCCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCA 156195
Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618
|| | |||||||| | | ||| | ||||||||||| || |||||| |||||| |||
Sbjct 156196 GCGATGCGGTTCCTCATGCGCTTTCTCTCCGCCTTGATCCGCTCCTGGGACTCCATATCG 156255
Query 241619 ATCGGAGAC 241627
|| || |||
Sbjct 156256 ATGGGTGAC 156264
Score = 89.7 bits (98), Expect = 1e-12
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558
|||||||| ||||||||||| ||||| | ||||| || | ||||| |||| |||
Sbjct 162978 TTCACTTTTTCCTCCAGCCGGGCGATCCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCA 163037
Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618
|| | |||||||| | | ||| | ||||||||||| || |||||| |||||| |||
Sbjct 163038 GCGATGCGGTTCCTCATGCGCTTTCTCTCCGCCTTGATCCGCTCCTGGGACTCCATATCG 163097
Query 241619 ATCGGAGAC 241627
|| || |||
Sbjct 163098 ATGGGTGAC 163106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931444642064640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |