Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq927 127 4e-24
>seq927
Length=612318
Score = 127 bits (140), Expect = 4e-24
Identities = 473/733 (65%), Gaps = 32/733 (4%)
Strand=Plus/Minus
Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662
|| |||||||| || |||||| ||||| || || || || ||| | || | |
Sbjct 154340 GCTTTCTTTGCTGCGAGTGATGGCATAGTCAATGAAAACTTGGTGGAGCGGTTTAGCCAA 154281
Query 25663 GAAGTGCAG--TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATG 25720
||| | ||| ||| || ||| |||||||| || ||||| || ||||| ||||
Sbjct 154280 GAAATTCAGATTACA--GAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAACAA 154223
Query 25721 TGCACTCTGAGGTGTATGCCAAGCTTCTGA-TGAC--GTACATTACAGACGTCGCCGAGA 25777
|| |||||| ||||| | || || | |||| ||| |||| ||| | || |
Sbjct 154222 A-CATTCTGAGATGTAT---AGTCTCCTCAATGACACGTATATTAAAGATTCCAAGGAAA 154167
Query 25778 GAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGG 25837
| || | || || ||||| ||| || || | |||||| |||||| ||||
Sbjct 154166 GGGAGTGTCTCTTCAACGCCATTGAGACAATGCCTTGTGTCAAGAAGAAGGCAGATTGGG 154107
Query 25838 CCATGAAGTGGATCA---ACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894
|| || ||||| ||| |||| ||||| | ||| || || | ||||| ||||
Sbjct 154106 CCTTGCGTTGGATTGGGGACAA--AGAG-GCTACCTATGGAGAACGTGTTGTAGCTTTTG 154050
Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGA 25954
| || ||||| || ||||| || ||||| ||||| | || |||||||||||| | |
Sbjct 154049 CCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAA-A 153991
Query 25955 AGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013
| |||| ||| | || || ||||||||||| || || ||||| || |||||| |
Sbjct 153990 TGAGGACTGATGTCTGGCCTCACATTTTCCAACGAACTTATTAGCAGAGATGAGGGTTTA 153931
Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAG 26073
||| | || |||||||||||| | | || ||| || | ||||||||||| | ||
Sbjct 153930 CACTGTGACTTTGCCTGCCTGATGTTCA---AACACCTGATACACAAACCTTCGGAGCAG 153874
Query 26074 ACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNN 26133
| ||| | || || | ||||| ||| || ||||||| |
Sbjct 153873 AAAGTCAAAGAAATAATTGTCAATGCTGTAAGGATAGAACAGGAGTTCCTCACAGAGGCA 153814
Query 26134 NNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTG 26193
| || ||||| || | |||| || | |||||| | ||||
Sbjct 153813 TTGCCGGTGAAGCTCATTGGGATGAATTGCACTTTAATGAAGCAGTGCATTGAATTTGTG 153754
Query 26194 GCCGAC---CATCTGCTGTGCCAGCTGGG-ACTCGCCAGACTCT-ACAGTACGCCTAACC 26248
|| ||| | | ||||| ||||||| | || ||| | | | |||| ||||
Sbjct 153753 GCAGACAGACTTATGCTG---GAGCTGGGTTTTAGCAAGATTTTCAGAGTA--GAAAACC 153699
Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308
| || ||||| ||||| || || || ||||||||||||| ||||||||||| ||||| |
Sbjct 153698 CATTTGACTTCATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAAGAGAG 153639
Query 26309 TCGGCGACTATCA 26321
| || || |||||
Sbjct 153638 TAGGAGAGTATCA 153626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928756896450240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |