Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq927 127 4e-24 >seq927 Length=612318 Score = 127 bits (140), Expect = 4e-24 Identities = 473/733 (65%), Gaps = 32/733 (4%) Strand=Plus/Minus Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662 || |||||||| || |||||| ||||| || || || || ||| | || | | Sbjct 154340 GCTTTCTTTGCTGCGAGTGATGGCATAGTCAATGAAAACTTGGTGGAGCGGTTTAGCCAA 154281 Query 25663 GAAGTGCAG--TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATG 25720 ||| | ||| ||| || ||| |||||||| || ||||| || ||||| |||| Sbjct 154280 GAAATTCAGATTACA--GAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAACAA 154223 Query 25721 TGCACTCTGAGGTGTATGCCAAGCTTCTGA-TGAC--GTACATTACAGACGTCGCCGAGA 25777 || |||||| ||||| | || || | |||| ||| |||| ||| | || | Sbjct 154222 A-CATTCTGAGATGTAT---AGTCTCCTCAATGACACGTATATTAAAGATTCCAAGGAAA 154167 Query 25778 GAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGG 25837 | || | || || ||||| ||| || || | |||||| |||||| |||| Sbjct 154166 GGGAGTGTCTCTTCAACGCCATTGAGACAATGCCTTGTGTCAAGAAGAAGGCAGATTGGG 154107 Query 25838 CCATGAAGTGGATCA---ACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 || || ||||| ||| |||| ||||| | ||| || || | ||||| |||| Sbjct 154106 CCTTGCGTTGGATTGGGGACAA--AGAG-GCTACCTATGGAGAACGTGTTGTAGCTTTTG 154050 Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGA 25954 | || ||||| || ||||| || ||||| ||||| | || |||||||||||| | | Sbjct 154049 CCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAA-A 153991 Query 25955 AGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 | |||| ||| | || || ||||||||||| || || ||||| || |||||| | Sbjct 153990 TGAGGACTGATGTCTGGCCTCACATTTTCCAACGAACTTATTAGCAGAGATGAGGGTTTA 153931 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAG 26073 ||| | || |||||||||||| | | || ||| || | ||||||||||| | || Sbjct 153930 CACTGTGACTTTGCCTGCCTGATGTTCA---AACACCTGATACACAAACCTTCGGAGCAG 153874 Query 26074 ACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNN 26133 | ||| | || || | ||||| ||| || ||||||| | Sbjct 153873 AAAGTCAAAGAAATAATTGTCAATGCTGTAAGGATAGAACAGGAGTTCCTCACAGAGGCA 153814 Query 26134 NNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTG 26193 | || ||||| || | |||| || | |||||| | |||| Sbjct 153813 TTGCCGGTGAAGCTCATTGGGATGAATTGCACTTTAATGAAGCAGTGCATTGAATTTGTG 153754 Query 26194 GCCGAC---CATCTGCTGTGCCAGCTGGG-ACTCGCCAGACTCT-ACAGTACGCCTAACC 26248 || ||| | | ||||| ||||||| | || ||| | | | |||| |||| Sbjct 153753 GCAGACAGACTTATGCTG---GAGCTGGGTTTTAGCAAGATTTTCAGAGTA--GAAAACC 153699 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308 | || ||||| ||||| || || || ||||||||||||| ||||||||||| ||||| | Sbjct 153698 CATTTGACTTCATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAAGAGAG 153639 Query 26309 TCGGCGACTATCA 26321 | || || ||||| Sbjct 153638 TAGGAGAGTATCA 153626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928756896450240