Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_019517.1
Length=136947
Score E
Sequences producing significant alignments: (Bits) Value
seq6988 158 1e-33
seq4817 98.7 9e-16
>seq6988
Length=1074
Score = 158 bits (174), Expect = 1e-33
Identities = 216/302 (72%), Gaps = 0/302 (0%)
Strand=Plus/Plus
Query 133661 TCCCGCATTAAGCCCAGCCAAATGGAGTGCTCCAGGCTATCATCGTAGTGCTCAAAATCC 133720
||||||||||| |||| ||||||||| |||||||| | ||||||||| ||| || |
Sbjct 463 TCCCGCATTAAACCCAACCAAATGGAATGCTCCAGCCCATCATCGTAATGCGTGAATGCG 522
Query 133721 CTTCCGGTATTGAATGGCGGGTCTATGTAAACACACTTCACTTTGCCTGCATACTCTTGC 133780
|| ||||| || | |||||||| || |||| |||||||| || || | | | || |||
Sbjct 523 CTACCGGTGTTATAGGGCGGGTCGATAAAAACGCACTTCACCTTTCCAGAAAATTCCTGC 582
Query 133781 TCTAGTGCCTTCAATGCCAGTAAGTTATCGCCAAAAATCAGTTTATTATCAAAAATATCG 133840
|| || ||||||| ||||| | ||| |||||||| ||||| ||||| || || |||
Sbjct 583 TCCAGCGCCTTCAGCGCCAGCAGGTTGTCGCCAAAGATCAGCCGGTTATCGAAGATGTCG 642
Query 133841 TTTTCGGTCACCTTTTTACTGGCGTGATAAGACTTGCTCGTGTCTTCTAACAAAATGCAC 133900
|| || ||||| | | |||||||| ||||| || ||||| | || |||| |
Sbjct 643 TTGTCCGTCACGCGATGCTTCGCGTGATATGACTTTTCCGGATCTTCCAGCAGGATGCGC 702
Query 133901 GGATCTAACTTTTTTCGCTCGTTTTTGCCTGTCCAGGTAAGCTCTAATTTGGTTTTGCTC 133960
|| || | ||| |||| | ||||| |||| || || || | ||| ||||||
Sbjct 703 GGCTCCAGCTTGGGCCGCTTCTCCTTGCCGATCCAAGTCAGTTCAAGTTTTTGCTTGCTC 762
Query 133961 AT 133962
||
Sbjct 763 AT 764
>seq4817
Length=1474
Score = 98.7 bits (108), Expect = 9e-16
Identities = 164/237 (69%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 132650 TCTTTCACAACCAAGTTCGGGGCAAGTTTATAATAGCGAAAGCCCCCGCCACCGTGCCAG 132709
|| || || | || | | |||||||| |||||||| ||||| ||||| || | ||||
Sbjct 1067 TCGTTGACGATCAGGCTGGGGGCAAGGCGGTAATAGCGGAAGCCGCCGCCGCCTTTCCAG 1126
Query 132710 TTTACAGATTTAGAAATACCACTTTGATCTTCGCCATCGATCACTTTTTGCAAGCGCGGG 132769
|||| || | | || | | || || ||||| ||||| || | || |||||||
Sbjct 1127 CCCACAGCTTCGGTGACGCCCCCCTTGTCCTCACCATCAATCACCTTCTTCAGGCGCGGG 1186
Query 132770 ATGATATGGGTATGACAATGATCACCTAGCTCGACCGAAATCCAACGTCTTTTCATCTTG 132829
||||| |||||||| || || || || ||||| ||| ||||| || | ||| |||
Sbjct 1187 ATGATGTGGGTATGGCAGTGCTCGCCCAGCTCCACCATGATCCAGCGGCGCCCCATTTTG 1246
Query 132830 TGAGCTACAGCAGCAGTAGTTCCTGAACCGCCGAACGAATCCAAGACTAAATCCCCT 132886
|| || || || | || || || ||||| |||| ||||| | || || || |||
Sbjct 1247 TGGGCCACCGCGCCGGTGGTGCCGGAACCAGCGAAGGAATCGAGTACCAAGTCTCCT 1303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 438060939084120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |