Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq125 334 9e-87
seq177 158 1e-33
seq732 102 9e-17
>seq125
Length=3779757
Score = 334 bits (370), Expect = 9e-87
Identities = 670/985 (68%), Gaps = 11/985 (1%)
Strand=Plus/Minus
Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111
|||||| || |||| ||| |||| ||| || | ||| | |||| ||| || ||||| ||
Sbjct 18634 CAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCGATGTCTGTGTCAAACTTATTGGC 18575
Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171
|||| ||||| | | | | | ||||||| || ||| || | || || || || ||
Sbjct 18574 AAACAAGTGGTG--CATGC-GCAACATCCAGTTCAAGTCACCTGCTCCAAAAACACACAC 18518
Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231
||| || | || ||||||||||| |||||||| | || || || | || ||||||||
Sbjct 18517 GGAGCGCACATGGACGCCGTTGCAGGGCGGGTAGGGGGCGCCCTTGGAAACATCACCTTC 18458
Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291
||||||||||||| |||||||| || || || ||||||||||| |||| || || |
Sbjct 18457 AAAGTACTGCCACTTGACAAACCTAGCAATTGCATGCATGTCGGACATGTCATACTTATG 18398
Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351
| |||| | | || || || | || || | ||| | |||||||| || | ||
Sbjct 18397 GCTTAGGGACAGTGATCCTGGGACTTCAGGGATCCTCTGAATAGTGGCCCAGAGATACTC 18338
Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411
|| |||||||| ||||| || | ||| ||||| |||| | |||| | | ||
Sbjct 18337 ATCTGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTTTGGATTTTTTCATTCTCTAG 18278
Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471
|||| || || || | || ||||| || || ||||| || || | ||| |
Sbjct 18277 CACGTACTCCACATATTTCCTACTGACCACAAAATAGGCACTGCCTGAAAACAGAGGTGT 18218
Query 160472 GGGTATAGGCGGCGTGTC-TTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCG 160530
| ||| ||| ||| |||||| || ||||| | || | ||| || || | |
Sbjct 18217 TTCAAGAGGAGGC-TGTAGTTTGTCAGTCCCTGTGTTTGTCAGCTTTCCATTAACAACTG 18159
Query 160531 CGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGT 160590
| | || |||||||| | | || | | |||||| || || || ||| |||
Sbjct 18158 TATAATGTTTTTTCCACCTTTCTTTTTTATTGGATGGCATTTTCTCAGTTTCGAGATTGT 18099
Query 160591 TGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGT 160650
| | || || || || || | | |||| || || ||||| || || | ||||| |
Sbjct 18098 TTTCTCCCATTAGTGACTTGAGTTTCCTGACAATTTCCAGGTTGGTTTTAATAGGAAAAT 18039
Query 160651 CGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCA 160710
| ||||||| | ||||||| ||||||||| | || |||| || |||||| ||
Sbjct 18038 CCATACCGCAAAGATTTATCAAGTACTTCCAATCTGCACTCATTCTGTAGAGGTCCTGCA 17979
Query 160711 TGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTAC 160770
| || || | ||| ||||| || || ||||| || || ||||| ||| |||| || | ||
Sbjct 17978 TACAGTTGAGATCAGCCTGAACCCGACTCCACGATGCATACACCACGGTCTCCAGCTGAC 17919
Query 160771 TGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAACA 160827
||||||||||||| ||| |||||| || | || || ||| | |||| |||| | |
Sbjct 17918 TGGCCACAAAGACATTACTGAAACAGGATGCAATGCCAATCACTGCAGCCAAAAAGGA-A 17860
Query 160828 TCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCC 160887
|| || | ||| |||||| || | |||||| | ||||||||| ||||||||||
Sbjct 17859 TC--CTCTGATTTTTTGTCCACATGAATGCAATAGAAATTCTGAGGCATATAGATGGCCC 17802
Query 160888 TGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAA 160947
|| | ||| || ||||| || ||||| ||||| | ||| || || || ||||| ||||
Sbjct 17801 GCAGGAGCCTGTCAAACATTTCAATCTTGTGATGAACCACTATGGAATATGCTATTGGAA 17742
Query 160948 ACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAAT 161007
||| | ||| || ||| |||| | | ||||| ||| ||||||| ||| ||
Sbjct 17741 ACTTTGCCTCTTCTTTACTAAGGGGTTCTACAATATACTTGCGCTTCTTGATGAAAGAAG 17682
Query 161008 CACAATCCCGCGTCATGTTGATATA 161032
||||| | |||||||| |||||
Sbjct 17681 TGCAATCACTAGTCATGTTTATATA 17657
>seq177
Length=2932736
Score = 158 bits (174), Expect = 1e-33
Identities = 225/317 (71%), Gaps = 0/317 (0%)
Strand=Plus/Plus
Query 168153 AGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATG 168212
||||| | ||| | | |||| || | ||| || || || || || |||||||||||| |
Sbjct 2837915 AGAGTGAGGCAGGCTATTCCTGAGACCTTCCCGGAACCAAAGGTATTGAAGAGGCACTTA 2837974
Query 168213 AAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCC 168272
| || || || ||||||| |||||| ||||| || || | |||||||| |||| |||
Sbjct 2837975 TAACACCCCTCATCCTCCAGGGTGGTGTTCCAGAAGGTAATGGTTGAGTTCTGGAGTCCC 2838034
Query 168273 AACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCG 168332
| || || ||||| | || ||||| | || || || ||||| || ||| ||| |
Sbjct 2838035 AGCTCAGTGATGTTGATCTTGTCCTTATAGGCAGCCTGGACCACAACCCCATGGGTCTTG 2838094
Query 168333 CTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGA 168392
|||||||| ||||||| || ||||| | ||||| || |||||||| || || | ||
Sbjct 2838095 CTGAAGGTCACCATGTTTTCTGGGCTTGCAGCCTTGATTTTCTGCCATGTCACAACCAAG 2838154
Query 168393 ACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGC 168452
|| || | || | ||| || |||| | ||||| || ||||||||||| | |
Sbjct 2838155 ACTTCCTGGGAAGTTTCCAGAGAGCATCGTAAGGAAGCAGGTGTGTTCAGCAGCTTTTTT 2838214
Query 168453 TCATCTTGAGTTACGAC 168469
|||||||| || || ||
Sbjct 2838215 TCATCTTGGGTCACCAC 2838231
>seq732
Length=870810
Score = 102 bits (112), Expect = 9e-17
Identities = 128/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291
||||| ||| |||| |||| || |||| |||||| | ||||| || |||| | || |
Sbjct 784787 AGATACTTTGCTAGCTCACTGGGAGAGTTATAATCTTCGACATGAATGAATGAATCTGCT 784728
Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351
||||| || |||||||| |||| || || || || | ||||| ||||| | | ||
Sbjct 784727 GGAATATAATTTTCATAGTTTTCCCTAGATGGCCCCAGAACTACAGGTACAGAGCCAGCC 784668
Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAA 176407
| || | ||||| |||||| | |||||| || |||| ||||||||||||||
Sbjct 784667 AGAAAAGCATTGTAGAGCTTTTCGGTGATGTAATCTTTGTGGATTGAGTTTTCAAA 784612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577164573417960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |