Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_020839.1 Length=39573 Score E Sequences producing significant alignments: (Bits) Value seq4620 118 3e-22 >seq4620 Length=1552 Score = 118 bits (130), Expect = 3e-22 Identities = 220/323 (68%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 30943 AGCAGCATGAAGACTTCGGAGCGGTTGATCTGGCCTTCCTTGTCGGTGTTGAAGGCGCGC 31002 ||||| ||||||| | | ||||||||| ||| ||||||||||| | ||| ||||| Sbjct 7 AGCAGGCTGAAGACATGGCTCCGGTTGATCGAGCCCTCCTTGTCGGTCTCGAAAGCGCGT 66 Query 31003 GTGACGATCGCACGGATCTCGGGACGGCTGTCGGCCGCCCATTCGTTCAGACACTCGTCG 31062 || || | | || | ||||| | | | ||||| ||||| |||||||| |||||||| Sbjct 67 GTCACCAAAGACCGCAACTCGGCCCTGGTATCGGCTGCCCACTCGTTCAGGCACTCGTCC 126 Query 31063 ATCAGTCCCTTCGCAACCTGCAGCTCGGGGCCGAAGGTCAGCAGATCGGAGACGCGAACC 31122 || || |||| |||| ||||| ||||| ||||| | | | ||| || |||||| Sbjct 127 ATGAGCGCCTTGGCAATCTGCATTTCGGGACCGAACACGATCCGGTCGTGAACCCGAACC 186 Query 31123 TCGATCTTGAAGAGGCCGTCATGGGTCAAGTAGGTCTTGTTGCCCTTCGCGCCGCCGATC 31182 || |||| | || || |||| |||| |||| | || ||||| | || || | Sbjct 187 TCAATCTGCATCAGCCCATCATAGGTCGCGTAGCTGCGATTACCCTTGGTCCCTCCCTTT 246 Query 31183 TTGAGACCATATTCCTGGGCGAGCATCGCATCGAGATCTCCGAGATCGTCGAAGGTATGC 31242 | || |||| || ||| |||| || || | | ||||| | || ||| || Sbjct 247 GCCACCCCGTATTTCTCGGCCAGCAGGGCGTCAAATGCGCCGAGCTGCTCATAGGCGTGG 306 Query 31243 CCCTTGAACCGCGCGACCTGGTC 31265 |||||||||| |||||| || Sbjct 307 CCCTTGAACCTTTTGACCTGCTC 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126500625859570