Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_020866.1 Length=40231 Score E Sequences producing significant alignments: (Bits) Value seq4620 118 3e-22 >seq4620 Length=1552 Score = 118 bits (130), Expect = 3e-22 Identities = 220/323 (68%), Gaps = 0/323 (0%) Strand=Plus/Minus Query 8505 GACCAGGTCGCGCGGTTCAAGGGGCATACCTTCGACGATCTCGGAGATCTCGATGCGATG 8564 || |||||| |||||||||| || ||| || | ||||| | | || || || Sbjct 329 GAGCAGGTCAAAAGGTTCAAGGGCCACGCCTATGAGCAGCTCGGCGCATTTGACGCCCTG 270 Query 8565 CTCGCCCAGGAATATGGTCTCAAGATCGGCGGCGCGAAGGGCAACAAGACCTACTTGACC 8624 || ||| || |||| || | | || || | ||||| || | |||| |||| Sbjct 269 CTGGCCGAGAAATACGGGGTGGCAAAGGGAGGGACCAAGGGTAATCGCAGCTACGCGACC 210 Query 8625 CATGACGGCCTCTTCAAGATCGAGGTTCGCGTCTCCGATCTGCTGACCTTCGGCCCCGAG 8684 |||| || || | |||| |||||||| || ||| | | | ||||| ||||| Sbjct 209 TATGATGGGCTGATGCAGATTGAGGTTCGGGTTCACGACCGGATCGTGTTCGGTCCCGAA 150 Query 8685 CTGCAGGTTGCGAAGGGACTGATCGACGAGTGTCTGAACGAATGGGCGGCCGACAGCCGT 8744 ||||| |||| |||| || || |||||||| |||||||| ||||| ||||| | | | Sbjct 149 ATGCAGATTGCCAAGGCGCTCATGGACGAGTGCCTGAACGAGTGGGCAGCCGATACCAGG 90 Query 8745 CCCGAGATCCGTGCGATCGTCACGCGCGCCTTCAACACCGACAAGGAAGGCCAGATCAAC 8804 ||||| | || | | || || ||||| ||| | ||||||||||| ||| ||||||| Sbjct 89 GCCGAGTTGCGGTCTTTGGTGACACGCGCTTTCGAGACCGACAAGGAGGGCTCGATCAAC 30 Query 8805 CGCTCCGAAGTCTTCATGCTGCT 8827 || | | ||||||| ||||| Sbjct 29 CGGAGCCATGTCTTCAGCCTGCT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128606036554286