Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq265 98.7 2e-15 seq808 93.3 8e-14 seq5307 91.5 3e-13 seq920 87.8 3e-12 seq331 86.0 1e-11 seq647 84.2 4e-11 >seq265 Length=2261556 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | || | ||| || ||| || ||||| || || || | ||| || Sbjct 841124 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 841065 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || ||| || ||||||||||| |||||||| ||||| || Sbjct 841064 AGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 841005 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| |||| || ||||| || | ||||| || || || || || || Sbjct 841004 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTC 840945 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || ||||| || || || ||||| || Sbjct 840944 CCGGTAAGGGTTTTCACGAAAATCTGCATCTT 840913 >seq808 Length=762264 Score = 93.3 bits (102), Expect = 8e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| || || ||||| || | ||| || ||||||||||| |||||||| || Sbjct 447967 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 447908 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || |||| |||| |||| || ||||| || | ||||| || || || || Sbjct 447907 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGAT 447848 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| | || || ||||| Sbjct 447847 GGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812 >seq5307 Length=1324 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||| || ||||| |||| || | || | |||||| ||||||||||| Sbjct 958 ATACCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCT 899 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | ||||| || |||||||| | | ||| || ||||| Sbjct 898 GAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGT 839 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || ||||| ||||| | ||| ||| |||||| || | ||| Sbjct 838 GGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCG 779 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || || || ||||| || ||||| Sbjct 778 ACCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729 >seq920 Length=534542 Score = 87.8 bits (96), Expect = 3e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| || ||||| || || || | ||| || | ||| || || ||||| || | ||| Sbjct 150048 AATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCT 150107 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 || ||||||||||| |||||||| |||| || || |||| |||| |||| | || Sbjct 150108 TTGCTGATCAGGAGGAATTCCTTCCTTATTCTGGATCTTGGCCTTTACATTTTCTTTTGT 150167 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| || | ||||| | || || || || || || || || ||||| || || || || Sbjct 150168 ATCCGAGGGTTCAACCTTGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTG 150227 Query 193358 CATTTT 193363 ||| || Sbjct 150228 CATCTT 150233 >seq331 Length=2147541 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | || | ||| || ||| || ||||| || || || | ||| || Sbjct 851450 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 851391 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || ||| || ||||||||||| |||||||| ||||| || Sbjct 851390 AGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 851331 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| |||| || ||||| || | ||| | | || || || || || Sbjct 851330 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTGATGGTCTTC 851271 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || | ||||| || || || ||||| || Sbjct 851270 CCGGTAAAGGTTTTCACGAAAATCTGCATCTT 851239 >seq647 Length=1105866 Score = 84.2 bits (92), Expect = 4e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| || ||||| || || || | ||| || | ||| || || | ||| || | ||| Sbjct 850233 AATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCT 850174 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 || ||||||||||| |||||||| ||||| || || ||| |||| |||| || || Sbjct 850173 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCTTTACATTTTCTATTGT 850114 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| || | ||| | || ||||| | || || || || ||||||| | || || || Sbjct 850113 ATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGCGTTTCCATGAAAATCTG 850054 Query 193358 CATTTT 193363 ||| || Sbjct 850053 CATCTT 850048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899569258956720