Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq265 98.7 2e-15
seq808 93.3 8e-14
seq5307 91.5 3e-13
seq920 87.8 3e-12
seq331 86.0 1e-11
seq647 84.2 4e-11
>seq265
Length=2261556
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | || | ||| || ||| || ||||| || || || | ||| ||
Sbjct 841124 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 841065
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| || || ||||| || ||| || ||||||||||| |||||||| ||||| ||
Sbjct 841064 AGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 841005
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || ||||| || | ||||| || || || || || ||
Sbjct 841004 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTC 840945
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || || ||||| || || || ||||| ||
Sbjct 840944 CCGGTAAGGGTTTTCACGAAAATCTGCATCTT 840913
>seq808
Length=762264
Score = 93.3 bits (102), Expect = 8e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || | ||| || || ||||| || | ||| || ||||||||||| |||||||| ||
Sbjct 447967 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 447908
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||| || || |||| |||| |||| || ||||| || | ||||| || || || ||
Sbjct 447907 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGAT 447848
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || ||||| | || || |||||
Sbjct 447847 GGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812
>seq5307
Length=1324
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||| || ||||| |||| || | || | |||||| |||||||||||
Sbjct 958 ATACCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCT 899
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | ||||| || |||||||| | | ||| || |||||
Sbjct 898 GAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGT 839
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || || ||||| ||||| | ||| ||| |||||| || | |||
Sbjct 838 GGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCG 779
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || || || || || || ||||| || |||||
Sbjct 778 ACCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq920
Length=534542
Score = 87.8 bits (96), Expect = 3e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
||| || ||||| || || || | ||| || | ||| || || ||||| || | |||
Sbjct 150048 AATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCT 150107
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
|| ||||||||||| |||||||| |||| || || |||| |||| |||| | ||
Sbjct 150108 TTGCTGATCAGGAGGAATTCCTTCCTTATTCTGGATCTTGGCCTTTACATTTTCTTTTGT 150167
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
||| || | ||||| | || || || || || || || || ||||| || || || ||
Sbjct 150168 ATCCGAGGGTTCAACCTTGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTG 150227
Query 193358 CATTTT 193363
||| ||
Sbjct 150228 CATCTT 150233
>seq331
Length=2147541
Score = 86.0 bits (94), Expect = 1e-11
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | || | ||| || ||| || ||||| || || || | ||| ||
Sbjct 851450 ACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 851391
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
| ||| || || ||||| || ||| || ||||||||||| |||||||| ||||| ||
Sbjct 851390 AGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 851331
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || ||||| || | ||| | | || || || || ||
Sbjct 851330 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTGATGGTCTTC 851271
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || | ||||| || || || ||||| ||
Sbjct 851270 CCGGTAAAGGTTTTCACGAAAATCTGCATCTT 851239
>seq647
Length=1105866
Score = 84.2 bits (92), Expect = 4e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
||| || ||||| || || || | ||| || | ||| || || | ||| || | |||
Sbjct 850233 AATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCT 850174
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
|| ||||||||||| |||||||| ||||| || || ||| |||| |||| || ||
Sbjct 850173 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCTTTACATTTTCTATTGT 850114
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
||| || | ||| | || ||||| | || || || || ||||||| | || || ||
Sbjct 850113 ATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGCGTTTCCATGAAAATCTG 850054
Query 193358 CATTTT 193363
||| ||
Sbjct 850053 CATCTT 850048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899569258956720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |