Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq927 123 4e-23
>seq927
Length=612318
Score = 123 bits (136), Expect = 4e-23
Identities = 374/578 (65%), Gaps = 7/578 (1%)
Strand=Plus/Plus
Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217
|| ||||| ||| ||||||||| ||||||||| || | |||||| ||| || |
Sbjct 153914 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGG 153973
Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277
|| | ||| | |||| ||| || ||||| ||||||||||| ||| || |||||||||
Sbjct 153974 CCAGACATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAG 154033
Query 18278 ATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAGT 18337
|| || || || || || |||| | | ||| || | | | ||| |
Sbjct 154034 ATTCCTTCCACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCA 154093
Query 18338 ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTA 18397
||||| ||||| ||| | | | ||| || || |||| || || ||
Sbjct 154094 ATCCAACGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTG 154153
Query 18398 AACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATT 18457
|| | | || |||| ||||||||||| ||||| ||||| | | | | ||||||
Sbjct 154154 AAGAGACACTCCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACATC 154213
Query 18458 TCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATAT 18517
||||||||| || ||||||| || || || || | ||| || | | || || | |
Sbjct 154214 TCAGAATGTTTG-TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATC 154272
Query 18518 TGAATCTC---GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGAT 18574
||||| || ||| ||| | || ||||| || ||||| ||||| || ||| |
Sbjct 154273 TGAATTTCTTGGCT---AAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCA 154329
Query 18575 GCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTTCCAT 18634
|| || || || | ||||| || |||| | | |||| | ||| || | |||
Sbjct 154330 GCAAAGAAAGCAAGAACATGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAG 154389
Query 18635 TCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGT 18694
| | | || || || ||||| ||||| || | ||||||||| || | || || |
Sbjct 154390 TGCTGGAGGTCCTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTC 154449
Query 18695 TTGTACATTTTATAAATATCTTCATGTTGTATAGGAAA 18732
|| ||||| | ||||||| | | || ||||||||
Sbjct 154450 TTATACATCTGCCAAATATCATGGTATTCGATAGGAAA 154487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731802737463600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |