Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq808 127 4e-24
seq265 118 2e-21
seq331 114 3e-20
seq920 105 1e-17
seq71 87.8 4e-12
seq416 84.2 4e-11
>seq808
Length=762264
Score = 127 bits (140), Expect = 4e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | ||| | ||| ||| || || || || ||||
Sbjct 448039 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAG 447981
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || | || |||| |||| ||| || ||||||||||| | ||| || |||||||| |
Sbjct 447980 ACAAGATATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 447921
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| | |||||| | ||| |
Sbjct 447920 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAA 447861
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| || || || ||||| || ||||| | ||||| || || ||||||||
Sbjct 447860 CCTCGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812
>seq265
Length=2261556
Score = 118 bits (130), Expect = 2e-21
Identities = 167/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | ||| | ||| ||| || || || || ||||
Sbjct 841143 ACCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAG 841085
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| ||| || ||||||||||| ||| || |||||||| |
Sbjct 841084 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAG 841025
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| | ||| || | ||| |
Sbjct 841024 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAA 840965
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || || ||||| || || || | ||||| | || |||||||| ||
Sbjct 840964 CCTCGAGGGTGATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATCTT 840913
>seq331
Length=2147541
Score = 114 bits (126), Expect = 3e-20
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | ||| | ||| ||| || || || || ||||
Sbjct 851469 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAG 851411
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || ||| |||| |||| ||| || ||||||||||| ||| || |||||||| |
Sbjct 851410 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAG 851351
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||| ||||| || || || |||||||| ||| | ||| || | |||
Sbjct 851350 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAG 851291
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| | || || ||||| || || || || ||||| | || |||||||| ||
Sbjct 851290 CCTTGAGGGTGATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCATCTT 851239
>seq920
Length=534542
Score = 105 bits (116), Expect = 1e-17
Identities = 140/193 (73%), Gaps = 1/193 (1%)
Strand=Plus/Plus
Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406
|||| || || || || ||||| || || ||| |||| |||| ||| || ||||||||||
Sbjct 150042 CTTTTGA-ATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGA 150100
Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466
| | ||| || |||||||| || |||||||| |||| || || || ||||||||
Sbjct 150101 TCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATTCTGGATCTTGGCCTTTACATTTT 150160
Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526
| | | ||| || | ||| || | || || ||||| || ||||| | ||||| | |
Sbjct 150161 CTTTTGTATCCGAGGGTTCAACCTTGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACGA 150220
Query 192527 ATATCTGCATTTT 192539
| |||||||| ||
Sbjct 150221 AAATCTGCATCTT 150233
>seq71
Length=4921646
Score = 87.8 bits (96), Expect = 4e-12
Identities = 163/236 (69%), Gaps = 9/236 (4%)
Strand=Plus/Plus
Query 192308 TACCACCTCTAAGACGT---AATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAA 192363
|| |||| | |||| || ||||| | ||| | ||| | ||| ||| || || || |||
Sbjct 1110201 TAGCACCACCAAGAAGTCTCAATACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAA 1110259
Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423
|| | || ||| | || |||| || || ||||||||||||| ||| || ||||||
Sbjct 1110260 CCAAA----GTACGTCCCTCTTCCAGTTACTTGCCAGCAAAGATTAGTCTTTGCTGATCA 1110315
Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483
|| || |||||||| |||| || || || |||||||| ||| | ||| || | |
Sbjct 1110316 GGAGGAATTCCTTCCTTATTCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGT 1110375
Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || ||||| ||||| || || | ||||| | || |||||||| ||
Sbjct 1110376 TCAACCGTGAGAGTGATGGTCTTCAGAGCCAGGGTTTTCACGAAAATCTGCATCTT 1110431
>seq416
Length=1521731
Score = 84.2 bits (92), Expect = 4e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | ||| | || || | || | ||| | ||| | | || || || |||||
Sbjct 880260 ACCACCACGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTGTGGAATGTTGTAGTCAGA 880319
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| || ||| | | ||| |||| | ||||||||| | | ||| || ||| |||| ||
Sbjct 880320 CAAAGTGCGTCCCGCTGCCAGTTGTCTGCCAGCAAAGCTCAGTCTTTGCTGAACAGGAGG 880379
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|||||||| ||| | || || || ||| |||| | | | | | | ||| ||
Sbjct 880380 AATTCCTTCCTTAACCTGGATCTTGACCTTTCCATTTTCTGTTGTACGCAAGGGTTCAAC 880439
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| |||||||||||||| ||||| | ||||| || || || ||||| ||
Sbjct 880440 CTCGAGAGTAATGGTTTTTCCAGTAAGGGTTTTCATGAAAATTTGCATCTT 880490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984384502055850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |