Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq927 131 5e-25
seq432 100 8e-16
>seq927
Length=612318
Score = 131 bits (144), Expect = 5e-25
Identities = 362/542 (67%), Gaps = 15/542 (3%)
Strand=Plus/Minus
Query 133103 GAGATTTGGCAGATGTATAAAAAACAGCAAGATTTATTTTGGACTTCAACTGAAGTAGAT 133162
|| ||||||||||||||||| ||| | | | || |||||||| | ||||| |||
Sbjct 154469 GATATTTGGCAGATGTATAAGAAAGCGGAGGCTTCCTTTTGGACAGCTGAGGAAGTGGAT 154410
Query 133163 TTATCCAAAGACC--CAGCCCACTGGGAAGCCCTTACTGGGGATGAAAAACATTTTATTT 133220
| ||||| |||| |||| ||||||||||||| | ||||| | | ||||||| |
Sbjct 154409 CTCTCCAAGGACCTCCAGC--ACTGGGAAGCCCTGAAGCCTGATGAGAGATATTTTATAT 154352
Query 133221 CT-ATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACA 133279
| ||| | || || || ||||||||||||||||| || || |||||| || |
Sbjct 154351 CCCATGTTCTT-GCTTTCTTTGCTGCGAGTGATGGCATAGTCAATGAAAACTTGGTGGAG 154293
Query 133280 CGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCG 133339
||||||| |||| |||| | | |||||||| || ||||| | || |||||
Sbjct 154292 CGGTTTAGCCAAGAAATTCAGATTACAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCC 154233
Query 133340 ATGGAAAATATCCATTCTATCA--CATATTCTACTCTAATTGATACTTACATCAAAGATA 133397
|||| ||| | |||||| | ||| ||| ||| | ||| || || || ||||||
Sbjct 154232 ATGG-AAACAAACATTCTGAGATGTATAGTCTCCTC--AATGACACGTATATTAAAGATT 154176
Query 133398 CCGTCCAGAAGCACAAACTATTCAACGCCATTAGCGA-ATTTCCTTGTATTAAAAAGAAA 133456
|| | | | | || |||||||||||| | || | | |||||| | || |||||
Sbjct 154175 CCAAGGAAAGGGAGTGTCTCTTCAACGCCATT-GAGACAATGCCTTGTGTCAAGAAGAAG 154117
Query 133457 TCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTT 133516
| || ||||| | ||||| |||||| || | | || ||| | ||
Sbjct 154116 GCAGATTGGGCCTTGCGTTGGATTGGGGACAAAGAGGCTACCTATGGAGAACGTGTTGTA 154057
Query 133517 GCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCT 133575
|||||||| | ||| || || || || || |||| | || ||| || || || |||||
Sbjct 154056 GCTTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTC-TTTTGCATCGATATTCTGGCT 153998
Query 133576 TAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGA 133635
|| || | || | | |||| || ||||| |||||||||||| || || ||
Sbjct 153997 CAAGAAATGAGGACTGATGTCTGGCCTCACATTTTCCAACGAACTTATTAGCAGAGATGA 153938
Query 133636 GG 133637
||
Sbjct 153937 GG 153936
>seq432
Length=1618426
Score = 100 bits (110), Expect = 8e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666
||||||| || || || |||||||| || || || || ||||||||||||| |||||
Sbjct 214129 ACCAGTTTCAGCAGTCTTGACAGCTGTGTCGATGAGCCCCTCACGACCACCCATGGCATG 214188
Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726
||| || | ||| ||| || || | | ||||| |||| || || |||||
Sbjct 214189 GAAAAAGAACTCGGTGGGTGTGAGGCCAGCCAGGTAGGAGTTCTCCACAAAGCCACGGCT 214248
Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786
||| ||| || ||| |||| | ||||| ||||| |||| || || | || ||||
Sbjct 214249 CTCAGGCCCATAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAATCCAAATGG 214308
Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAA 302839
|| ||||| || || ||||||||||| || | | | ||| | ||| ||||
Sbjct 214309 AATCCGCTTGCCCTCCACGTTCTGCTGCCCGACGACAGCAATGACCTGGGAAA 214361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471674828633427
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |