Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_021557.1
Length=37378
Score E
Sequences producing significant alignments: (Bits) Value
seq5790 201 3e-47
>seq5790
Length=1233
Score = 201 bits (222), Expect = 3e-47
Identities = 346/498 (69%), Gaps = 6/498 (1%)
Strand=Plus/Plus
Query 13784 CGGCTTCCAGTATTTTCTGGAGACCTACCTGCCGCACTATGTGAAGGGCGAACACAGCCT 13843
|||||||| | ||| |||||||||| |||||||||||| | ||||| ||||||
Sbjct 43 CGGCTTCCGCTTTTTCATGGAGACCTATCTGCCGCACTATATTCGCGGCGAGGCCAGCCT 102
Query 13844 GTTTCACAAGACAATCTTTGCGCGCGTTCCGGAAATCCTAGCCTCCGAAAAGGGCGTTAG 13903
||| ||| || | || || || || || ||| | ||| | ||||| || |||||||| |
Sbjct 103 GTTCCACGAGGCGATTTTCGCCCGGGTGCCGCAGATCATGGCCTCGGACAAGGGCGTCCG 162
Query 13904 AGATTTGTTCATCGCGCCACGCGGCTCGTCCAAATCTACCCACCTGTCA--CTCGGTTTT 13961
|| | ||| ||||||| ||||| ||||| ||||| ||||| | ||| ||||| |
Sbjct 163 CGACATCTTCGTCGCGCCGCGCGGGTCGTCGAAATCCACCCA--TATCAGCCTCGGCATG 220
Query 13962 GCGCTTTATTGCATCTGCCTTGGCTACAAGCGGTATATTCTGGAGGTCTGCGACGTCTAT 14021
| ||| || ||||| | | | || |||| | | |||||||||||||||
Sbjct 221 GTGCTGTACCGCATCGTCATGCGGCACGCACGGTTCGTCGTCGAGGTCTGCGACGTCGCC 280
Query 14022 GCACAGGCCGCACTGCTGATAGAGGCGATCAAAGCAGAACTGACGGAAAATCCCCGCCTT 14081
|| || || || ||| |||| ||||| || || || || ||||| | || || || |||
Sbjct 281 GCGCAAGCGGCGCTGTTGATCGAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTT 340
Query 14082 GCCAACGATTTTCCCGA-GGTTGCTGGTCAGGGACGTGTCTGGCGTGAAGGCGAGATCGT 14140
||||| || || | ||| || |||| || |||||||| |||||| |||| |
Sbjct 341 CGGTCGGATTTCCCGGATGCGTGC-GGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTAT 399
Query 14141 CACCAAGAACAATATCCGCGTCGAAGGGCTTGGCGCGAACCAGAAACTGCGCGGCCGTCG 14200
||| | ||| | || || || ||||| |||||| |||||||| ||
Sbjct 400 TACCCGTACCAACGTAATGATCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCG 459
Query 14201 CCATGGTCCATATCGTCCGGACCTGATGTTCTTTGACGATCTGGAGAATGACGAGGCCGT 14260
|| |||||||| || || ||||| || |||| ||||| |||||||| ||||| || ||
Sbjct 460 ACACGGTCCATACCGACCCGACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGT 519
Query 14261 GCGGTCGCCCGAGCAGCG 14278
|| ||| || |||||
Sbjct 520 CCGCGTGCCGGATCAGCG 537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119477257356680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |