Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_021557.1 Length=37378 Score E Sequences producing significant alignments: (Bits) Value seq5790 201 3e-47 >seq5790 Length=1233 Score = 201 bits (222), Expect = 3e-47 Identities = 346/498 (69%), Gaps = 6/498 (1%) Strand=Plus/Plus Query 13784 CGGCTTCCAGTATTTTCTGGAGACCTACCTGCCGCACTATGTGAAGGGCGAACACAGCCT 13843 |||||||| | ||| |||||||||| |||||||||||| | ||||| |||||| Sbjct 43 CGGCTTCCGCTTTTTCATGGAGACCTATCTGCCGCACTATATTCGCGGCGAGGCCAGCCT 102 Query 13844 GTTTCACAAGACAATCTTTGCGCGCGTTCCGGAAATCCTAGCCTCCGAAAAGGGCGTTAG 13903 ||| ||| || | || || || || || ||| | ||| | ||||| || |||||||| | Sbjct 103 GTTCCACGAGGCGATTTTCGCCCGGGTGCCGCAGATCATGGCCTCGGACAAGGGCGTCCG 162 Query 13904 AGATTTGTTCATCGCGCCACGCGGCTCGTCCAAATCTACCCACCTGTCA--CTCGGTTTT 13961 || | ||| ||||||| ||||| ||||| ||||| ||||| | ||| ||||| | Sbjct 163 CGACATCTTCGTCGCGCCGCGCGGGTCGTCGAAATCCACCCA--TATCAGCCTCGGCATG 220 Query 13962 GCGCTTTATTGCATCTGCCTTGGCTACAAGCGGTATATTCTGGAGGTCTGCGACGTCTAT 14021 | ||| || ||||| | | | || |||| | | ||||||||||||||| Sbjct 221 GTGCTGTACCGCATCGTCATGCGGCACGCACGGTTCGTCGTCGAGGTCTGCGACGTCGCC 280 Query 14022 GCACAGGCCGCACTGCTGATAGAGGCGATCAAAGCAGAACTGACGGAAAATCCCCGCCTT 14081 || || || || ||| |||| ||||| || || || || ||||| | || || || ||| Sbjct 281 GCGCAAGCGGCGCTGTTGATCGAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTT 340 Query 14082 GCCAACGATTTTCCCGA-GGTTGCTGGTCAGGGACGTGTCTGGCGTGAAGGCGAGATCGT 14140 ||||| || || | ||| || |||| || |||||||| |||||| |||| | Sbjct 341 CGGTCGGATTTCCCGGATGCGTGC-GGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTAT 399 Query 14141 CACCAAGAACAATATCCGCGTCGAAGGGCTTGGCGCGAACCAGAAACTGCGCGGCCGTCG 14200 ||| | ||| | || || || ||||| |||||| |||||||| || Sbjct 400 TACCCGTACCAACGTAATGATCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCG 459 Query 14201 CCATGGTCCATATCGTCCGGACCTGATGTTCTTTGACGATCTGGAGAATGACGAGGCCGT 14260 || |||||||| || || ||||| || |||| ||||| |||||||| ||||| || || Sbjct 460 ACACGGTCCATACCGACCCGACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGT 519 Query 14261 GCGGTCGCCCGAGCAGCG 14278 || ||| || ||||| Sbjct 520 CCGCGTGCCGGATCAGCG 537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119477257356680