Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq808 140 3e-28
seq265 131 2e-25
seq5307 118 1e-21
seq331 118 1e-21
seq920 113 4e-20
seq647 111 1e-19
seq717 104 2e-17
seq376 96.9 3e-15
seq56 87.8 2e-12
seq298 86.0 6e-12
seq73 86.0 6e-12
seq45 84.2 2e-11
seq636 82.4 7e-11
seq553 82.4 7e-11
>seq808
Length=762264
Score = 140 bits (154), Expect = 3e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || || ||||| || || || || || || || ||||| || ||| || |
Sbjct 447811 GATGCAGATTTTCATGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTC 447870
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 447871 AGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 447930
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAA-CATGTCAGATTATA 24881
||| | |||||||||| || || || ||||| ||| || | | | |||| || || |
Sbjct 447931 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATG-GACATATCTTGTCTGACTACA 447989
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||||| || || || || | |||||| || | || || ||
Sbjct 447990 ACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 448038
>seq265
Length=2261556
Score = 131 bits (144), Expect = 2e-25
Identities = 159/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || ||||| || || || || ||||| || ||| || |
Sbjct 840915 GATGCAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCCTC 840974
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 840975 GGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 841034
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 841035 GCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 841094
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
|||||||||||| || || || || | |||||| ||
Sbjct 841095 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 841131
>seq5307
Length=1324
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || || || || || |||
Sbjct 728 GATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCAG 787
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || || | ||| | ||| ||||||||||| || || || || || || |
Sbjct 788 TGACACTATTGAGAATGCCAAAGCTAAA-ATCCAAGACAAGGAGGGCATCCCACCTGACC 846
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || ||| |||| ||||| || ||||||||||||||| | | | ||||| ||||
Sbjct 847 AGCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATA 906
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
| || || || || || || |||||||||||| | || |||| || ||
Sbjct 907 ATATCCAGAAAGAGTCCACTCTACACTTGGTGCTTCGTCTGCGAGGTGG 955
>seq331
Length=2147541
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| | ||||| || || || || ||| | | ||| || |
Sbjct 851241 GATGCAGATTTTCGTGAAAACCTTTACCGGGAAGACCATCACCCTCAAGGCTGAACCCTC 851300
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 851301 GGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 851360
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 851361 GCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 851420
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||| || || || || | |||||| || | || || ||
Sbjct 851421 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 851468
>seq920
Length=534542
Score = 113 bits (124), Expect = 4e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || || || || || || || ||| | || ||| || |
Sbjct 150231 GATGCAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCAAGGTTGAACCCTC 150172
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| ||||| ||||| |||||||| | || |||||||| ||||| |||||
Sbjct 150171 GGATACAAAAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGATCA 150112
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 150111 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 150052
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||| | || || || ||||| |||| || | || || ||
Sbjct 150051 CATTCAAAAGGAGTTCACTCTTCATCTTGG-GTTGAGACTTCGTGGTGG 150004
>seq647
Length=1105866
Score = 111 bits (122), Expect = 1e-19
Identities = 145/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || || ||||||| || || || || | || || || | ||| || |
Sbjct 850050 GATGCAGATTTTCATGGAAACGCTTACTGGGAAGACCGTCACTCTTGAGGCTGAACCCTC 850109
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 850110 AGATACAATAGAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 850169
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||||| | || || || ||||| ||| | | |||| || || ||
Sbjct 850170 GCAAAGACTGATCTTTACTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAA 850229
Query 24883 CATTCAAAAGGAATCGACACT 24903
|||||||||||| || || ||
Sbjct 850230 CATTCAAAAGGAGTCCACTCT 850250
>seq717
Length=839118
Score = 104 bits (114), Expect = 2e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || || || || || |||
Sbjct 563670 GATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCAG 563611
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| || ||||||||||| || || || || || || ||
Sbjct 563610 TGACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCA 563551
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||| ||||| || ||||||||||||||| | | | ||||| | |||
Sbjct 563550 GCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTGTAA 563491
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924
|| || || || || || || ||||||||| | || ||||
Sbjct 563490 TATCCAGAAAGAGTCCACTCTGCACTTGGTGCTTCGTCTGCG 563449
>seq376
Length=1527771
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 9/229 (4%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|| |||||| || | || || || || || || || || || || || || ||| || |
Sbjct 1196289 GAAGCAGATTTTCGTGAAGACCCTTACTGGGAAGACCATCACCCTGGAGGTTGAACCCTC 1196348
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| ||| || || |||||||| ||||| |||||
Sbjct 1196349 GGATACAATAGAAAATGTAAAGG-------CCAGGATAAGGAAGGAATTCCTCCTGATCA 1196401
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881
||| | |||||||| | || || || ||||| ||| || | || | ||| || || |
Sbjct 1196402 GCAAAGACTGATCTTTACTGGCAAGCAACTGGAAGATG-GACATACTTTGTCTGACTACA 1196460
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||||| || || || || | |||||| || | || || ||
Sbjct 1196461 ACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1196509
>seq56
Length=5443799
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/215 (70%), Gaps = 12/215 (6%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||| ||||||| | || || || || || || || || || || || || || |||
Sbjct 2722715 GATGCGGATCTTTGTGAAGACTCTGACGGGCAAGACCATCACACTGGAGGTTGAGCCCAG 2722656
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAAT---ACCTCCCG 24818
||||| | || || | |||| | ||| ||||||||||| || || || |||| |
Sbjct 2722655 TGACACCATGGAGAATGTTAAAGCTAAA-ATCCAAGACAAGGAGGGCATTCCACCTGACC 2722597
Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATT 24878
| || || | | |||| ||||| || ||||||||||||||| | | ||||| |
Sbjct 2722596 AGCAGCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGAT-------ATCTCTCAGACT 2722544
Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||| || | || || || || || |||||||||
Sbjct 2722543 ATAATATCTAGAAAGAGTCCACCCTGCACTTGGTG 2722509
>seq298
Length=2265018
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/228 (69%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||| |||| | || || || || || || || || || | || || || |||
Sbjct 584823 GATGCAGACCTTTGTGAAGACCCTGACGGGCAAGACCATCACACCTGAGGTCGAGCCCAG 584764
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| || ||||||||||| || || || || || || ||
Sbjct 584763 TGACACTATTGAGAATGTCAAAGCTAA-ATCCAAGACAAGGAGGGCATCCCACCTGACCA 584705
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| |||| |||| || ||||||||||||||| | | | || || || ||
Sbjct 584704 GCAGCGTCTGATTTTTGTGGGCAAACAGCTGGAGGATGGCCGCA--CTCTCTGACTAGAA 584647
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || || || || || || ||||||||| | || |||| || ||
Sbjct 584646 TATCCAGAAAGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGAGGTGG 584599
>seq73
Length=4601553
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | | || || || || || || || || ||||| || || |||
Sbjct 4089877 GATGCAGATCTTTGTGTAGACCCTGACGGGCAAGACCATCACACTCGAGGTCGAGCCCAG 4089936
Query 24763 CGACAC-AGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || || | ||| | ||| ||||||||||| || || || || || || |
Sbjct 4089937 TGACACTACTAAGAATGTCAAAGCTAAA-ATCCAAGACAAGGAGGGCATCCCACCTGACC 4089995
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| | | | |||| |||| || ||||||||||||||| | | | |||| || |
Sbjct 4089996 AGCTGCATCTGATTTTTGTTGGCAAACAGCTGGAGGAT----GGACTCTCTCAGCCTACA 4090051
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
| || || || || || || || |||||||||
Sbjct 4090052 ATATCCAGAAAGAGTCCACTCTGCACTTGGTG 4090083
>seq45
Length=5545317
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | || || || || || || || || || ||||| || |||||
Sbjct 1737897 GATGCAGATTTTTGTGAAGACCCTGACAGGCAAGACCATCACACTCGAGGTC-AAGCCT- 1737840
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| || | || ||| || ||||||||||| || || || || || || ||
Sbjct 1737839 -GACACCACTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCA 1737781
Query 24823 ACAACGTTTGATCTTTGCCGGG-AAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTAT 24880
|| || |||| |||| ||| ||||||||||||| | | | || | ||||| |||
Sbjct 1737780 GCAGAGTCTGATTTTTGTGGGGCCAACAGCTGGAGGA-TGGTCACACTCTCTCAGACTAT 1737722
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || || || || || || || |||||||||
Sbjct 1737721 AATATCCAGAAAGAGTCCACTCTGCACTTGGTG 1737689
>seq636
Length=1077480
Score = 82.4 bits (90), Expect = 7e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 138502 TTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGC 138561
||| | ||||||||||| || | ||| |||| |||| ||| |||||| |||| | ||
Sbjct 918559 TTTCTCACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATATGGT 918500
Query 138562 TCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCAT 138611
|||| || || || ||||||||||||||||| || | || || |||||
Sbjct 918499 TCAATGGACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCAT 918450
>seq553
Length=1528452
Score = 82.4 bits (90), Expect = 7e-11
Identities = 145/211 (69%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || | ||||| || || || ||||| || | |||
Sbjct 585157 GATGCAGATCTTTGTGAAGACCCTGATAGGTAAGACCATCACACTCGAGGTCAAGCCCAG 585216
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| || ||||||||||| || || || || | || |
Sbjct 585217 TGACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCGACTGACCG 585276
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || |||| ||||| || ||||||||| ||||| | | ||||| |||||
Sbjct 585277 GCAGTGTCTGATTTTTGCGGGCAAACAGCTGCAGGATAGCTGCGCTCTCTCAGACTATAA 585336
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
| ||| || || ||||| |||||||||
Sbjct 585337 TACTCA----GAGTCCACACTGCACTTGGTG 585363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449855022815880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |