Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq808 140 3e-28 seq265 131 2e-25 seq5307 118 1e-21 seq331 118 1e-21 seq920 113 4e-20 seq647 111 1e-19 seq717 104 2e-17 seq376 96.9 3e-15 seq56 87.8 2e-12 seq298 86.0 6e-12 seq73 86.0 6e-12 seq45 84.2 2e-11 seq636 82.4 7e-11 seq553 82.4 7e-11 >seq808 Length=762264 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || || ||||| || || || || || || || ||||| || ||| || | Sbjct 447811 GATGCAGATTTTCATGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTC 447870 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 447871 AGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 447930 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAA-CATGTCAGATTATA 24881 ||| | |||||||||| || || || ||||| ||| || | | | |||| || || | Sbjct 447931 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATG-GACATATCTTGTCTGACTACA 447989 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||| || || || || | |||||| || | || || || Sbjct 447990 ACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 448038 >seq265 Length=2261556 Score = 131 bits (144), Expect = 2e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || ||||| || || || || ||||| || ||| || | Sbjct 840915 GATGCAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCCTC 840974 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 840975 GGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 841034 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||||||| || || || ||||| ||| | | |||| || || || Sbjct 841035 GCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 841094 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||||||||||| || || || || | |||||| || Sbjct 841095 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 841131 >seq5307 Length=1324 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || || ||| Sbjct 728 GATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCAG 787 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || || | ||| | ||| ||||||||||| || || || || || || | Sbjct 788 TGACACTATTGAGAATGCCAAAGCTAAA-ATCCAAGACAAGGAGGGCATCCCACCTGACC 846 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || ||| |||| ||||| || ||||||||||||||| | | | ||||| |||| Sbjct 847 AGCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATA 906 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || || || || || || |||||||||||| | || |||| || || Sbjct 907 ATATCCAGAAAGAGTCCACTCTACACTTGGTGCTTCGTCTGCGAGGTGG 955 >seq331 Length=2147541 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| | ||||| || || || || ||| | | ||| || | Sbjct 851241 GATGCAGATTTTCGTGAAAACCTTTACCGGGAAGACCATCACCCTCAAGGCTGAACCCTC 851300 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 851301 GGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 851360 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||||||| || || || ||||| ||| | | |||| || || || Sbjct 851361 GCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 851420 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||| || || || || | |||||| || | || || || Sbjct 851421 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 851468 >seq920 Length=534542 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || || || || || || || ||| | || ||| || | Sbjct 150231 GATGCAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCAAGGTTGAACCCTC 150172 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| ||||| ||||| |||||||| | || |||||||| ||||| ||||| Sbjct 150171 GGATACAAAAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGATCA 150112 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||| || || || ||||| ||| | | |||| || || || Sbjct 150111 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 150052 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||| | || || || ||||| |||| || | || || || Sbjct 150051 CATTCAAAAGGAGTTCACTCTTCATCTTGG-GTTGAGACTTCGTGGTGG 150004 >seq647 Length=1105866 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || || ||||||| || || || || | || || || | ||| || | Sbjct 850050 GATGCAGATTTTCATGGAAACGCTTACTGGGAAGACCGTCACTCTTGAGGCTGAACCCTC 850109 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 850110 AGATACAATAGAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 850169 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||| | || || || ||||| ||| | | |||| || || || Sbjct 850170 GCAAAGACTGATCTTTACTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAA 850229 Query 24883 CATTCAAAAGGAATCGACACT 24903 |||||||||||| || || || Sbjct 850230 CATTCAAAAGGAGTCCACTCT 850250 >seq717 Length=839118 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || || ||| Sbjct 563670 GATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCAG 563611 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || ||||||||||| || || || || || || || Sbjct 563610 TGACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCA 563551 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | |||| ||||| || ||||||||||||||| | | | ||||| | ||| Sbjct 563550 GCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTGTAA 563491 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924 || || || || || || || ||||||||| | || |||| Sbjct 563490 TATCCAGAAAGAGTCCACTCTGCACTTGGTGCTTCGTCTGCG 563449 >seq376 Length=1527771 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 9/229 (4%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 || |||||| || | || || || || || || || || || || || || ||| || | Sbjct 1196289 GAAGCAGATTTTCGTGAAGACCCTTACTGGGAAGACCATCACCCTGGAGGTTGAACCCTC 1196348 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| ||| || || |||||||| ||||| ||||| Sbjct 1196349 GGATACAATAGAAAATGTAAAGG-------CCAGGATAAGGAAGGAATTCCTCCTGATCA 1196401 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881 ||| | |||||||| | || || || ||||| ||| || | || | ||| || || | Sbjct 1196402 GCAAAGACTGATCTTTACTGGCAAGCAACTGGAAGATG-GACATACTTTGTCTGACTACA 1196460 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||| || || || || | |||||| || | || || || Sbjct 1196461 ACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1196509 >seq56 Length=5443799 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 12/215 (6%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||| ||||||| | || || || || || || || || || || || || || ||| Sbjct 2722715 GATGCGGATCTTTGTGAAGACTCTGACGGGCAAGACCATCACACTGGAGGTTGAGCCCAG 2722656 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAAT---ACCTCCCG 24818 ||||| | || || | |||| | ||| ||||||||||| || || || |||| | Sbjct 2722655 TGACACCATGGAGAATGTTAAAGCTAAA-ATCCAAGACAAGGAGGGCATTCCACCTGACC 2722597 Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATT 24878 | || || | | |||| ||||| || ||||||||||||||| | | ||||| | Sbjct 2722596 AGCAGCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGAT-------ATCTCTCAGACT 2722544 Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||| || | || || || || || ||||||||| Sbjct 2722543 ATAATATCTAGAAAGAGTCCACCCTGCACTTGGTG 2722509 >seq298 Length=2265018 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||| |||| | || || || || || || || || || | || || || ||| Sbjct 584823 GATGCAGACCTTTGTGAAGACCCTGACGGGCAAGACCATCACACCTGAGGTCGAGCCCAG 584764 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || ||||||||||| || || || || || || || Sbjct 584763 TGACACTATTGAGAATGTCAAAGCTAA-ATCCAAGACAAGGAGGGCATCCCACCTGACCA 584705 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||| |||| || ||||||||||||||| | | | || || || || Sbjct 584704 GCAGCGTCTGATTTTTGTGGGCAAACAGCTGGAGGATGGCCGCA--CTCTCTGACTAGAA 584647 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || || || ||||||||| | || |||| || || Sbjct 584646 TATCCAGAAAGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGAGGTGG 584599 >seq73 Length=4601553 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | | || || || || || || || || ||||| || || ||| Sbjct 4089877 GATGCAGATCTTTGTGTAGACCCTGACGGGCAAGACCATCACACTCGAGGTCGAGCCCAG 4089936 Query 24763 CGACAC-AGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || || | ||| | ||| ||||||||||| || || || || || || | Sbjct 4089937 TGACACTACTAAGAATGTCAAAGCTAAA-ATCCAAGACAAGGAGGGCATCCCACCTGACC 4089995 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | | | | |||| |||| || ||||||||||||||| | | | |||| || | Sbjct 4089996 AGCTGCATCTGATTTTTGTTGGCAAACAGCTGGAGGAT----GGACTCTCTCAGCCTACA 4090051 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913 | || || || || || || || ||||||||| Sbjct 4090052 ATATCCAGAAAGAGTCCACTCTGCACTTGGTG 4090083 >seq45 Length=5545317 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || || || || || || || || ||||| || ||||| Sbjct 1737897 GATGCAGATTTTTGTGAAGACCCTGACAGGCAAGACCATCACACTCGAGGTC-AAGCCT- 1737840 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| || | || ||| || ||||||||||| || || || || || || || Sbjct 1737839 -GACACCACTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCA 1737781 Query 24823 ACAACGTTTGATCTTTGCCGGG-AAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTAT 24880 || || |||| |||| ||| ||||||||||||| | | | || | ||||| ||| Sbjct 1737780 GCAGAGTCTGATTTTTGTGGGGCCAACAGCTGGAGGA-TGGTCACACTCTCTCAGACTAT 1737722 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || || || || || || || ||||||||| Sbjct 1737721 AATATCCAGAAAGAGTCCACTCTGCACTTGGTG 1737689 >seq636 Length=1077480 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 138502 TTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGC 138561 ||| | ||||||||||| || | ||| |||| |||| ||| |||||| |||| | || Sbjct 918559 TTTCTCACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATATGGT 918500 Query 138562 TCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCAT 138611 |||| || || || ||||||||||||||||| || | || || ||||| Sbjct 918499 TCAATGGACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCAT 918450 >seq553 Length=1528452 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || | ||||| || || || ||||| || | ||| Sbjct 585157 GATGCAGATCTTTGTGAAGACCCTGATAGGTAAGACCATCACACTCGAGGTCAAGCCCAG 585216 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || ||||||||||| || || || || | || | Sbjct 585217 TGACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCGACTGACCG 585276 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||| ||||| || ||||||||| ||||| | | ||||| ||||| Sbjct 585277 GCAGTGTCTGATTTTTGCGGGCAAACAGCTGCAGGATAGCTGCGCTCTCTCAGACTATAA 585336 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 | ||| || || ||||| ||||||||| Sbjct 585337 TACTCA----GAGTCCACACTGCACTTGGTG 585363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449855022815880