Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_022323.1
Length=136910
Score E
Sequences producing significant alignments: (Bits) Value
seq6988 158 1e-33
seq4817 109 5e-19
>seq6988
Length=1074
Score = 158 bits (174), Expect = 1e-33
Identities = 217/303 (72%), Gaps = 3/303 (1%)
Strand=Plus/Plus
Query 133626 ATCCCTCATTAAGCCCAACCAAATGGAATGCTCCAGACTATCATCGTAGTGCTCAAAAGC 133685
||||| |||||| ||||||||||||||||||||||| | ||||||||| ||| || ||
Sbjct 462 ATCCCGCATTAAACCCAACCAAATGGAATGCTCCAGCCCATCATCGTAATGCGTGAATGC 521
Query 133686 CCTCCCGGTGTTGAATGGTGGGTCTATGTAAACACACTTCACTTTGCCTGCGTACTCTTG 133745
|| |||||||| | || ||||| || |||| |||||||| || || | | || ||
Sbjct 522 GCTACCGGTGTTATAGGGCGGGTCGATAAAAACGCACTTCACCTTTCCAGAAAATTCCTG 581
Query 133746 CTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGCTTATTATCAAAAATATC 133805
||| |||||||||| || | | ||| || ||||| |||||| ||||| || || ||
Sbjct 582 CTCCAGCGCCTTCAGCGCCAGCAGGTTGTCGCCAAAGATCAGCCGGTTATCGAAGATGTC 641
Query 133806 GTTTTCGGTAACTCTCTGGCT---GTGGTAAGACTTACTCGAATCTTCTAACAAAATGTG 133862
||| || || || | || | ||| || ||||| || |||||| | || ||| |
Sbjct 642 GTTGTCCGTCACGCGATGCTTCGCGTGATATGACTTTTCCGGATCTTCCAGCAGGATGCG 701
Query 133863 CGGCTCTAATTTTTTGCGCTCGTTTTTACCTATCCAGGTAAGTTCTAATTTGGTTTTGCT 133922
|||||| | || |||| | || || ||||| || ||||| | ||| |||||
Sbjct 702 CGGCTCCAGCTTGGGCCGCTTCTCCTTGCCGATCCAAGTCAGTTCAAGTTTTTGCTTGCT 761
Query 133923 CAT 133925
|||
Sbjct 762 CAT 764
>seq4817
Length=1474
Score = 109 bits (120), Expect = 5e-19
Identities = 159/221 (72%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 132634 GGGGCAAGTTTGTAATAACGGAAGCCACCACCACCTTGCCAGTTTACAGACTTAGA--AA 132691
|||||||| |||||| |||||||| || || |||| |||| |||| ||| | |
Sbjct 1085 GGGGCAAGGCGGTAATAGCGGAAGCCGCCGCCGCCTTTCCAGCCCACAG-CTTCGGTGAC 1143
Query 132692 TACCACCTTGATCTTCCCCATCGATCACTTTTTCCAAGCGCGGAATAATATGGGTATGGC 132751
|| ||||| || || ||||| ||||| || | || |||||| || || ||||||||||
Sbjct 1144 GCCCCCCTTG-TCCTCACCATCAATCACCTTCTTCAGGCGCGGGATGATGTGGGTATGGC 1202
Query 132752 AATGATCACCAATCTCGATGGAGATCCAACGTCTTTTCATCTTGTGAGCTACAGCGGCAG 132811
| || || || | ||| | |||||| || | ||| ||||| || || ||| | |
Sbjct 1203 AGTGCTCGCCCAGCTCCACCATGATCCAGCGGCGCCCCATTTTGTGGGCCACCGCGCCGG 1262
Query 132812 TAGTTCCCGAACCACCGAATGAATCCAATACCAAATCACCT 132852
| || || |||||| |||| ||||| | |||||| || |||
Sbjct 1263 TGGTGCCGGAACCAGCGAAGGAATCGAGTACCAAGTCTCCT 1303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 437942550289200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |