Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_022323.1 Length=136910 Score E Sequences producing significant alignments: (Bits) Value seq6988 158 1e-33 seq4817 109 5e-19 >seq6988 Length=1074 Score = 158 bits (174), Expect = 1e-33 Identities = 217/303 (72%), Gaps = 3/303 (1%) Strand=Plus/Plus Query 133626 ATCCCTCATTAAGCCCAACCAAATGGAATGCTCCAGACTATCATCGTAGTGCTCAAAAGC 133685 ||||| |||||| ||||||||||||||||||||||| | ||||||||| ||| || || Sbjct 462 ATCCCGCATTAAACCCAACCAAATGGAATGCTCCAGCCCATCATCGTAATGCGTGAATGC 521 Query 133686 CCTCCCGGTGTTGAATGGTGGGTCTATGTAAACACACTTCACTTTGCCTGCGTACTCTTG 133745 || |||||||| | || ||||| || |||| |||||||| || || | | || || Sbjct 522 GCTACCGGTGTTATAGGGCGGGTCGATAAAAACGCACTTCACCTTTCCAGAAAATTCCTG 581 Query 133746 CTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGCTTATTATCAAAAATATC 133805 ||| |||||||||| || | | ||| || ||||| |||||| ||||| || || || Sbjct 582 CTCCAGCGCCTTCAGCGCCAGCAGGTTGTCGCCAAAGATCAGCCGGTTATCGAAGATGTC 641 Query 133806 GTTTTCGGTAACTCTCTGGCT---GTGGTAAGACTTACTCGAATCTTCTAACAAAATGTG 133862 ||| || || || | || | ||| || ||||| || |||||| | || ||| | Sbjct 642 GTTGTCCGTCACGCGATGCTTCGCGTGATATGACTTTTCCGGATCTTCCAGCAGGATGCG 701 Query 133863 CGGCTCTAATTTTTTGCGCTCGTTTTTACCTATCCAGGTAAGTTCTAATTTGGTTTTGCT 133922 |||||| | || |||| | || || ||||| || ||||| | ||| ||||| Sbjct 702 CGGCTCCAGCTTGGGCCGCTTCTCCTTGCCGATCCAAGTCAGTTCAAGTTTTTGCTTGCT 761 Query 133923 CAT 133925 ||| Sbjct 762 CAT 764 >seq4817 Length=1474 Score = 109 bits (120), Expect = 5e-19 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 132634 GGGGCAAGTTTGTAATAACGGAAGCCACCACCACCTTGCCAGTTTACAGACTTAGA--AA 132691 |||||||| |||||| |||||||| || || |||| |||| |||| ||| | | Sbjct 1085 GGGGCAAGGCGGTAATAGCGGAAGCCGCCGCCGCCTTTCCAGCCCACAG-CTTCGGTGAC 1143 Query 132692 TACCACCTTGATCTTCCCCATCGATCACTTTTTCCAAGCGCGGAATAATATGGGTATGGC 132751 || ||||| || || ||||| ||||| || | || |||||| || || |||||||||| Sbjct 1144 GCCCCCCTTG-TCCTCACCATCAATCACCTTCTTCAGGCGCGGGATGATGTGGGTATGGC 1202 Query 132752 AATGATCACCAATCTCGATGGAGATCCAACGTCTTTTCATCTTGTGAGCTACAGCGGCAG 132811 | || || || | ||| | |||||| || | ||| ||||| || || ||| | | Sbjct 1203 AGTGCTCGCCCAGCTCCACCATGATCCAGCGGCGCCCCATTTTGTGGGCCACCGCGCCGG 1262 Query 132812 TAGTTCCCGAACCACCGAATGAATCCAATACCAAATCACCT 132852 | || || |||||| |||| ||||| | |||||| || ||| Sbjct 1263 TGGTGCCGGAACCAGCGAAGGAATCGAGTACCAAGTCTCCT 1303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 437942550289200