Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq5307 132 3e-26 seq717 129 4e-25 seq298 109 4e-19 seq304 105 4e-18 seq808 91.5 1e-13 seq265 91.5 1e-13 seq553 87.8 1e-12 seq210 87.8 1e-12 seq73 87.8 1e-12 seq65 82.4 5e-11 seq13 82.4 5e-11 >seq5307 Length=1324 Score = 132 bits (146), Expect = 3e-26 Identities = 159/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| || |||||||| || || |||| |||| Sbjct 940 AGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCC 881 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || || || ||||| || |||||||| | || | ||||||||||| Sbjct 880 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 821 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||| | || || || | ||| ||| |||||| |||| || |||| Sbjct 820 TGGATTTTAGCTTTGGC--ATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGG 763 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||| |||||||| |||||||||||||| Sbjct 762 TCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729 >seq717 Length=839118 Score = 129 bits (142), Expect = 4e-25 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| || ||| |||| || || |||| |||| Sbjct 563458 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCC 563517 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || || || ||||| | |||||||| | || | ||||||||||| Sbjct 563518 TCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 563577 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || || | ||| ||| |||||| |||| || |||| Sbjct 563578 TGGATTTTAGCTTTGAC--ATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGG 563635 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||| |||||||| |||||||||||||| Sbjct 563636 TCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669 >seq298 Length=2265018 Score = 109 bits (120), Expect = 4e-19 Identities = 155/214 (72%), Gaps = 7/214 (3%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| || || ||||| || || |||| |||| Sbjct 584614 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAGAGAG--TGCGGCCATCC 584671 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || | || ||||| || |||||||| | || | ||||||||||| Sbjct 584672 TCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTC- 584730 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 || ||| |||||| || || || | ||| ||| |||||| ||| || |||| Sbjct 584731 TTGGATTTAGCTTTGAC--ATTCTCAATAGTGTCACTGGGCTCGACCTCAGGTGTGATGG 584788 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||| |||||||| |||||| ||||||| Sbjct 584789 TCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822 >seq304 Length=2338375 Score = 105 bits (116), Expect = 4e-18 Identities = 153/213 (72%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAG-GCTGCGCTCATC 34824 || |||| || | ||||| ||| || || || ||||||||||| || ||||| |||| Sbjct 1425273 AGCACCAAGTACAGGGTGCACTCTTTATGGATATTATAGTCCGAGAGTGCTGC---CATC 1425217 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || || ||||| || |||||||| || | ||||||||||| Sbjct 1425216 TTCCAGCTGTTTGCCTGCAAAAATCAGACGCTGCTGGTCAGATGGGATGCCCTCCTTGTC 1425157 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | |||||| |||||| | | | | || ||| | || || | || ||||| Sbjct 1425156 TTGTATTTTAGCTTTGACAGTCTCAGTAGTGTCCCTGGGCCCGGACTC-AGTGTGATGGT 1425098 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||| | |||||||| |||||||||||||| Sbjct 1425097 CTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 1425065 >seq808 Length=762264 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| ||| |||||| |||||||| ||||| || | | | | || Sbjct 448026 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATATGTCCA 447967 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || ||||||||||| || || |||||||||| |||||| || | || | || ||||| Sbjct 447966 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 447907 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || || || | |||| | || || || || || | ||| ||| Sbjct 447906 TCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGATG 447847 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || ||||| || | || |||||||| Sbjct 447846 GTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812 >seq265 Length=2261556 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| ||| |||||| |||||||| ||||| || | | || || Sbjct 841130 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA 841071 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || ||||||||||| || || |||||| ||| |||||| || | || | || ||||| Sbjct 841070 TCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 841011 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || || || | |||| | || || || || || | ||| ||| Sbjct 841010 TCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATG 840951 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || ||||| || || || |||||||| Sbjct 840950 GTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916 >seq553 Length=1528452 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/190 (72%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 34791 TCTGAATGTTATAGTCCGATAGGCTGC-GCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 ||||| | |||||||| || || || ||| ||| | ||| || || || || || ||| Sbjct 585344 TCTGAGTATTATAGTCTGAGAGAGCGCAGCT-ATCCTGCAGCTGTTTGCCCGCAAAAATC 585286 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 || | ||| |||| ||| | ||||||||||| | ||||| |||||| || || Sbjct 585285 AGACACTGCCGGTCAGTCGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGAC--ATTCT 585228 Query 34910 --ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 || | ||| ||| || ||| || | || |||||||| || | |||||||| |||| Sbjct 585227 CAATAGTGTCACTGGGCTTGACCTCGAGTGTGATGGTCTTACCTATCAGGGTCTTCACAA 585168 Query 34968 AGATCTGCAT 34977 |||||||||| Sbjct 585167 AGATCTGCAT 585158 >seq210 Length=3024228 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 34799 TTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGC 34858 || ||||| || || || | |||| |||||||| || || | || | ||| | ||| Sbjct 2224382 TTGTAGTCTGAGAGAGTGTGGACATCCTCCAGTTGTTTGCCCACAAAAACCAGACACTGC 2224441 Query 34859 TGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATT 34916 ||||| | || | ||||||||||| | ||||| |||||| || || || | | Sbjct 2224442 TGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGAC--ATTCTCAATAGTGT 2224499 Query 34917 CATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 || | | |||||| || | ||||||||||| | || |||||||| || |||||||||| Sbjct 2224500 CACTAGGCTCGACCTCGAGTGTTATGGTCTTGCTGGTCAGGGTCTTCACGAAGATCTGCA 2224559 Query 34977 T 34977 | Sbjct 2224560 T 2224560 >seq73 Length=4601553 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| ||||| || || ||| | || || | | ||| Sbjct 4090085 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTGTAGGCTGAGAGAGTCC----ATCC 4090030 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || | || ||||| | ||||||| | || | ||||||||||| Sbjct 4090029 TCCAGCTGTTTGCCAACAAAAATCAGATGCAGCTGGTCAGGTGGGATGCCCTCCTTGTCT 4089970 Query 34886 TTTATTTTTTGTTTGACGGATGCTA--TCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || | | ||| ||| |||||| || | || |||| Sbjct 4089969 TGGATTTTAGCTTTGAC--ATTCTTAGTAGTGTCACTGGGCTCGACCTCGAGTGTGATGG 4089912 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||| ||||||| |||||||||||||| Sbjct 4089911 TCTTGCCCGTCAGGGTCTACACAAAGATCTGCAT 4089878 >seq65 Length=5215179 Score = 82.4 bits (90), Expect = 5e-11 Identities = 83/106 (78%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 34874 CCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACAT 34931 ||||||||||| | ||||| |||||| || || || | ||| ||| |||||| | Sbjct 1906721 CCCTCCTTGTCTTGGATTTTAGCTTTGAC--ATTCTCAATAGTGTCACTGGGCTCGACCT 1906664 Query 34932 CAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || |||||||| ||||| |||||||| |||||||||||||| Sbjct 1906663 CAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1906618 >seq13 Length=8615514 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/210 (70%), Gaps = 10/210 (5%) Strand=Plus/Plus Query 34771 CAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGC-TGCGCTCATCGTCCA 34829 || ||| | |||| ||| ||| | || |||||||| || | | ||| |||| | || Sbjct 1044042 CAAGTGCAGGGTGGACTCTTTCAGGATATTATAGTCTGAGAAGAGTGCAGCCATCCTACA 1044101 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCT--TGCGGCACCCCCTCCTTGTCGTT 34887 | | || || || || ||||| | |||||||| || || || |||||||| | Sbjct 1044102 GCTATTTGCCTGCCAATATCAGGTGCTGCTGGTCAGATGGGGTGCC---TCCTTGTCTTG 1044158 Query 34888 TATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 ||||| |||||| || || || | || ||| ||| || |||| || |||||| Sbjct 1044159 GATTTTAGCTTTGAC--ATTCTCAATAGTGTCCCTGGGCTCAACCTCAAGTGTGATGGTC 1044216 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975 || ||||| |||||||| |||||||||||| Sbjct 1044217 TTGCCCGTCAGGGTCTTCACAAAGATCTGC 1044246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325662747816449