Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq808 114 1e-20
seq265 114 1e-20
seq331 111 1e-19
seq920 104 2e-17
seq647 102 6e-17
seq376 98.7 8e-16
seq210 86.0 5e-12
>seq808
Length=762264
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | | | | | |||
Sbjct 448024 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATATGTCCATC 447965
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| | |||| |||||||||||| || ||||| || || || ||
Sbjct 447964 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 447905
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || || ||| |||||| || || || |||| || || || || || ||
Sbjct 447904 CTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGATGGT 447845
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| | |||||| | || ||||||||
Sbjct 447844 CTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812
>seq265
Length=2261556
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | | || || |||
Sbjct 841128 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 841069
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| | ||| |||||||||||| || ||||| || || || ||
Sbjct 841068 TTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 841009
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || || ||| |||||| || || || |||| || || || || || ||
Sbjct 841008 CTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 840949
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || | |||||| || || |||||||| ||
Sbjct 840948 CTTCCCGGTAAGGGTTTTCACGAAAATCTGCATCTT 840913
>seq331
Length=2147541
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | | || || |||
Sbjct 851454 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 851395
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| | ||| |||||||||||| || ||||| || || || ||
Sbjct 851394 TTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 851335
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || || ||| |||||| || || || |||| | | || || || ||
Sbjct 851334 CTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTGATGGT 851275
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || |||||||| || || |||||||| ||
Sbjct 851274 CTTCCCGGTAAAGGTTTTCACGAAAATCTGCATCTT 851239
>seq920
Length=534542
Score = 104 bits (114), Expect = 2e-17
Identities = 151/212 (71%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 29579 CCAA-ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
|||| |||||| ||| | || ||||||||||| || || | | || || ||| ||
Sbjct 150022 CCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 150081
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
||||| ||||||||| | |||| |||||||||||| || ||||| || || || | ||
Sbjct 150082 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATTCTGG 150141
Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757
| || || ||| ||||| || || || |||| || | || || || || ||
Sbjct 150142 ATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAGGGTGATGGTCTTC 150201
Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||||| | |||||| || || |||||||| ||
Sbjct 150202 CCAGTAAGGGTTTTCACGAAAATCTGCATCTT 150233
>seq647
Length=1105866
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 29586 AAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTT 29645
||| ||||| || ||||||||||| || || | | ||||| ||| || ||||| ||
Sbjct 850251 AAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTT 850192
Query 29646 GCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG 29705
||||| | | |||| |||||||||||| || ||||| || || || || || | ||
Sbjct 850191 GCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGAC 850132
Query 29706 TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAA 29765
|| ||| |||||| || || || |||| | |||||||| | || || ||||| |
Sbjct 850131 CTTTACATTTTCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAG 850072
Query 29766 GGTTTTAACAAATATCTGCATTTT 29789
|||| | || |||||||| ||
Sbjct 850071 CGTTTCCATGAAAATCTGCATCTT 850048
>seq376
Length=1527771
Score = 98.7 bits (108), Expect = 8e-16
Identities = 148/211 (70%), Gaps = 7/211 (3%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||||| || || | | || | |||
Sbjct 1196495 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATC 1196436
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||| | | |||| |||||||||||| || ||||| || || || ||
Sbjct 1196435 TTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1196376
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| ||| ||| |||||| || || || |||| || || || || || ||
Sbjct 1196375 CTGGCCTTT-------ACATTTTCTATTGTATCCGAGGGTTCAACCTCCAGGGTGATGGT 1196323
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGC 29784
|| ||||| | ||| || || || ||||||
Sbjct 1196322 CTTCCCAGTAAGGGTCTTCACGAAAATCTGC 1196292
>seq210
Length=3024228
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||| || ||| || ||| || || ||||| | ||| | | || || || |
Sbjct 2224334 CCACCCCACAGACGTAGTGTCAAGTGCAGAGTGGACTGTTTCTAGTTATTGTAGTCTGAG 2224393
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || ||||||||||| || | | || | ||||| || || ||
Sbjct 2224394 AGAGTGTGGACATCCTCCAGTTGTTTGCCCACAAAAACCAGACACTGCTGGTCAGGTGGG 2224453
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| |||||||| | ||| ||||||| | || | ||||||| | | || ||
Sbjct 2224454 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTAGGCTCGACC 2224513
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| || |||| || | ||| || || || ||||||||
Sbjct 2224514 TCGAGTGTTATGGTCTTGCTGGTCAGGGTCTTCACGAAGATCTGCAT 2224560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385183655222511
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |