Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_024134.1 Length=139020 Score E Sequences producing significant alignments: (Bits) Value seq6988 158 1e-33 seq4817 113 4e-20 >seq6988 Length=1074 Score = 158 bits (174), Expect = 1e-33 Identities = 217/303 (72%), Gaps = 3/303 (1%) Strand=Plus/Plus Query 135736 ATCCCTCATTAAGCCCAGCCAAATGGAATGCTCCAGGCTATCATCGTAGTGCTCAAAAGC 135795 ||||| |||||| |||| |||||||||||||||||| | ||||||||| ||| || || Sbjct 462 ATCCCGCATTAAACCCAACCAAATGGAATGCTCCAGCCCATCATCGTAATGCGTGAATGC 521 Query 135796 CCTTCCGGTATTGAATGGTGGGTCGATGTAAACACACTTCACTTTGCCTGTATACTCTTG 135855 || ||||| || | || |||||||| |||| |||||||| || || | | | || || Sbjct 522 GCTACCGGTGTTATAGGGCGGGTCGATAAAAACGCACTTCACCTTTCCAGAAAATTCCTG 581 Query 135856 CTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGTTTATTATCAAAAATATC 135915 ||| |||||||||| || | | ||| || ||||| ||||| ||||| || || || Sbjct 582 CTCCAGCGCCTTCAGCGCCAGCAGGTTGTCGCCAAAGATCAGCCGGTTATCGAAGATGTC 641 Query 135916 GTTTTCGGTCAC---TTTCTGGCTGCGGTAAGACTTGCTCGAATCTTCTAACAAAATGTG 135972 ||| || ||||| | || | | || ||||| || |||||| | || ||| | Sbjct 642 GTTGTCCGTCACGCGATGCTTCGCGTGATATGACTTTTCCGGATCTTCCAGCAGGATGCG 701 Query 135973 CGGCTCTAGCTTTTTGCGCTCGTTTTTACCTATCCAGGTAAGTTCTAATTTAGTTTTGCT 136032 |||||| ||||| |||| | || || ||||| || ||||| | ||| ||||| Sbjct 702 CGGCTCCAGCTTGGGCCGCTTCTCCTTGCCGATCCAAGTCAGTTCAAGTTTTTGCTTGCT 761 Query 136033 CAT 136035 ||| Sbjct 762 CAT 764 >seq4817 Length=1474 Score = 113 bits (124), Expect = 4e-20 Identities = 153/210 (73%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 134755 GTAATAGCGGAAGCCACCACCACCTTGCCAGTTTACAGACTTAG--AAATACCCCCTTGA 134812 ||||||||||||||| || || |||| |||| |||| ||| | | |||||||| Sbjct 1096 GTAATAGCGGAAGCCGCCGCCGCCTTTCCAGCCCACAG-CTTCGGTGACGCCCCCCTTG- 1153 Query 134813 TCTTCACCATCGATCACTTTTTCCAAGCGCGGAATAATATGGGTATGACAATGATCACCT 134872 || |||||||| ||||| || | || |||||| || || |||||||| || || || || Sbjct 1154 TCCTCACCATCAATCACCTTCTTCAGGCGCGGGATGATGTGGGTATGGCAGTGCTCGCCC 1213 Query 134873 AGCTCGATTGAGATCCAACGTCTTTTCATCTTGTGAGCTACAGCAGCAGTAGTTCCCGAA 134932 ||||| | |||||| || | ||| ||||| || || || | || || || ||| Sbjct 1214 AGCTCCACCATGATCCAGCGGCGCCCCATTTTGTGGGCCACCGCGCCGGTGGTGCCGGAA 1273 Query 134933 CCACCGAATGAATCCAATACCAAATCGCCT 134962 ||| |||| ||||| | |||||| || ||| Sbjct 1274 CCAGCGAAGGAATCGAGTACCAAGTCTCCT 1303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444693911296800