Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq382 136 4e-27
seq173 100 3e-16
seq138 98.7 9e-16
>seq382
Length=1977272
Score = 136 bits (150), Expect = 4e-27
Identities = 715/1132 (63%), Gaps = 66/1132 (6%)
Strand=Plus/Plus
Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264
||||||| | ||| || || | ||| ||| || ||| |||| | | |||| | || |
Sbjct 487280 ATGCCTTCTATGTTGCGGACCTGGAAGACATTCTGAAGAAACATCTGAAATGGTTAAAAG 487339
Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCA-GAACGACGAGAGAGTCCTC 20323
|| | ||| |||| || ||||| || || || | | || | || | | |
Sbjct 487340 CTCTTCCTCGGGTCACCCCCTTTTATGCAGTCAAATGCAATGATAGCAGAACCA-TAGTG 487398
Query 20324 AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTA 20383
||||||||||||||| | || || |||||||||||||| ||| || || ||| |
Sbjct 487399 AAGACCCTAGCTGCCATGGGGACAGGATTTGACTGTGCCAGCAAGACTGAAATACAGCTG 487458
Query 20384 CTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCT 20443
| || | ||| || || | |||| ||||| | | ||| ||||||||||| ||
Sbjct 487459 GTACAGAGTCTAGGGGTACCTCCAGAAAGGATTATCTATGCAAATCCTTGTAAACAAGTG 487518
Query 20444 TCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGAA 20503
|| || || | |||| || | | |||||| | |||||||||||||||||||||
Sbjct 487519 TCTCAGATTAAACATGCTGCCAATAATGGAGTCCAGATGATGACTTTTGATAGTGAAGTC 487578
Query 20504 GAGCTTACCAAAATTG--ATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAAAG 20561
||| | | ||| ||| | || | | | || || |||||||| || ||||
Sbjct 487579 GAGTTGATGAAAGTTGCCAGGGCAT--ATCCAGAGGCCAAGCTGGTTTTGCAGATTGCCA 487636
Query 20562 TGGATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCA 20621
||||| || || ||| | | || ||||| || ||||| || | | || |||
Sbjct 487637 CTGATGATTCCAAAGCAGTCTGTCGTCTCAGTGTTAAATTTGGTGCCACACTCAAAACCA 487696
Query 20622 GCCAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTTCC 20681
|| | || | || || ||| | || | || || |||| ||||||||||
Sbjct 487697 GCAGGCTGCTTTTGGAATGGGTGAAAGAGCTAAATATTGATGTCATCGTTGTCAGCTTCC 487756
Query 20682 ACGTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCAGGA 20741
| ||||| ||||||||| ||| | || | | | | | ||| |||| ||| |||
Sbjct 487757 ATGTGGGAAGTGGCTGCGCTGATCCTGAGACCTTCGTGCAGGTCATCTCTGACGCCCGGA 487816
Query 20742 GAGCTTTTGACTTTGGCACGCTGATGGGCTTTGACATGTACCTCTTGGATATTGGTGGCG 20801
| ||| ||| || || ||||||| || | ||||||||||| |
Sbjct 487817 G-----CTGA------------GATTGGTTTCAACATGTATCTGCTTGATATTGGTGGTG 487859
Query 20802 GCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGTCATTA 20858
||||| |||||||| |||| || ||| | ||||| || || | || || |
Sbjct 487860 GCTTT-CCGGGATC--TGAGGATGTGAAGCTGAAATTTGAAGAGATCACCAGTGTAATCA 487916
Query 20859 ACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAACCTG 20918
|| | || |||| | | | || ||| | | ||||| | || | ||| || |
Sbjct 487917 ACCCAGCGCTGGACAAGTACTTCCCATCAAACTCAGGAGTGACAGTCATAGCTGAGCCAG 487976
Query 20919 GCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAA--GTG 20976
|||| ||||| | | | || || | || | || || | | | ||||| ||||| |
Sbjct 487977 GCAGATACTATGTTGCATCCGCTTTCACGCTTGCAGTTAATATCATTGCCAAAAAACTCG 488036
Query 20977 TGTTGAAG--ACA------CTCC--TG---------------GAGATAAAAAGTTTATGT 21011
| || ||| ||| |||| || | || |||| |||||||
Sbjct 488037 TATTAAAGGAACAAATAGGCTCCGATGACGAAGATGAGTCGAGCGAAAAAACCTTTATGT 488096
Query 21012 ATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCATGCTCGTC 21071
||||||| |||||||| || || || ||||| ||||| | | | | || || |
Sbjct 488097 ATTATGTGAATGATGGAGTGTACGGATCATTTAATTGCATCCTCTATGATCACGCCCACG 488156
Query 21072 CTATGCCTATGCTGCTTAAAGAA-AAACGC---CTTGAAGACAAAGACTATGTTTCTAGC 21127
| ||| | |||| |||| | ||| | || || | |||| || |||
Sbjct 488157 TGAAGCCCGTCCTGC----AGAAGAGGCGCAAACCAGATGAGAGGTACTACTCCTCCAGC 488212
Query 21128 ATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCAGAG 21187
|| ||||| || | || || ||| | ||| |||||||| |||| |||| |||| |||
Sbjct 488213 ATCTGGGGACCCACGTGTGACGGCCTCGATCGCATTGTTGAGCGCTGTGGCTTGCCCGAG 488272
Query 21188 CTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGCTCT 21247
| || |||||||||||| | | ||||| |||||||| ||||||| | | | | ||
Sbjct 488273 ATGCATGTGGGCGACTGGATGCTCTTTGAGAACATGGGTGCTTACACCGTCGCTGCCGCT 488332
Query 21248 TCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGC-ACTATGTTATTTCAGAG 21298
|| || || ||||| || ||| || | || | | ||||||| || ||| ||
Sbjct 488333 TCTACTTTCAACGGATT-CCAGAGGCCGACCATCTACTATGTGATGTCAAAG 488383
>seq173
Length=3078528
Score = 100 bits (110), Expect = 3e-16
Identities = 470/735 (64%), Gaps = 15/735 (2%)
Strand=Plus/Minus
Query 20201 AATAATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTC 20260
|| || ||||| | ||| | || || ||||| ||| || |||||||| | | |||| |
Sbjct 2555206 AAGAACGCCTTCTATGTTGTGGACCTGGGAGACATTTTGAAGAGACATCTGAAATGGTTA 2555147
Query 20261 AAGGCTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCA-GAACGACGAGAGAGT 20319
|| ||| | ||| || | || ||||| || || || | | || | || | |
Sbjct 2555146 AACGCTCTTCCTCGGGTTACCCC-TTTTATGCAGTCAAATGCAATGATAGCAGAACCA-T 2555089
Query 20320 CCTCAAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCA 20379
| ||||||||||||||| || ||||| |||||||||||||| ||| || || |
Sbjct 2555088 AGTGAAGACCCTAGCTGCCATTGGGACTGGATTTGACTGTGCCAGCAAGACTGAAATAGA 2555029
Query 20380 GTTACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCA 20439
| | || | ||| || || | |||| ||||| | | ||| ||||||||||| ||
Sbjct 2555028 ACTGGTACAGAGTCTTGGGGTGCCTCCAGAAAGGATTATCTATGCAAATCCTTGTAAACA 2554969
Query 20440 GCCTTCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGA 20499
|| || || | | | | || | | |||||| | |||||||||||||||||||
Sbjct 2554968 AGTGTCTCAGATTAAATGTACTGCCAATAATGGAGTCCAGATGATGACTTTTGATAGTGA 2554909
Query 20500 AGAAGAGCTTACCAAAATTGATCGCCTGCACCATGATGCTAAGCTGGTACTGAGGATTAA 20559
|| ||| ||| || ||| | || | | | ||| |||| || || ||
Sbjct 2554908 AGTCGAGTTTATGAACGTTGCCAGGGCACATCCAAAGCCCAAGTTGGTTTTGCGGGTTGC 2554849
Query 20560 AGTGGATGACTCTAACTCAGACAG-CATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAG 20618
||||| || || ||| | | ||| || ||||| || ||||| || | | ||
Sbjct 2554848 TACTGATGATTCCAAAGCAGTCTGTCAT-CTCAGTGTTAAATTTGGTGCCACACTCAAAA 2554790
Query 20619 CCAGCCAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCT 20678
||||| | || | || ||| ||| | || | | | || || || |||||||
Sbjct 2554789 CCAGCAGGCTGCTTTTGGAATGGGCGAAAGAGCTAAACATTTATGTCATTGGTGTCAGCT 2554730
Query 20679 TCCACGTGGGCAGTGGCTGCAAAGATGCACAGGCTTACAGAAAAGCCATAGCTGAGGCCA 20738
|||| ||||| |||||||||| ||| | || | | | | |||| ||| |||
Sbjct 2554729 TCCATGTGGGAAGTGGCTGCACTGATCCTGAGACCTTCGTGCAGGCCACCTCTGGTGCCT 2554670
Query 20739 GGAGAGCTTTTGACTTTGGCACGCTGA--TGGGCTTTGACATGTACCTCTTGGATATTGG 20796
| | | || || | || ||||| | || || ||||||| || | ||| ||||
Sbjct 2554669 GCTGTGTCCTTTACATGGG--AGCTGAGGTTGGTTTCAACATGTATCTGCTTGATGTTGG 2554612
Query 20797 TGGCGGCTTTCCCGGGATCAATGAGATTG---AGCCAACTTTTGAGGACATTGCAGAAGT 20853
||| |||||| | |||||| |||| || ||| | |||||||| || | ||
Sbjct 2554611 TGGTGGCTTT-CTGGGATC--TGAGGATGTGAAGCTGAAATTTGAGGAGATCACCAGTGT 2554555
Query 20854 CATTAACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGA 20913
|| ||| | || |||| | | |||| ||| || | ||||| | || | |||
Sbjct 2554554 AATCAACCCAGCACTGGACATGTATTTCCCATCAGACTCAGGAGTGACAGTCATAGCTGA 2554495
Query 20914 ACCTGGCAGGTACTA 20928
|| ||||| |||||
Sbjct 2554494 GCCAGGCAGATACTA 2554480
>seq138
Length=3455650
Score = 98.7 bits (108), Expect = 9e-16
Identities = 129/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181
|| ||||| |||||||| | || || ||| | ||| |||||||| |||| |||| ||
Sbjct 2329127 TCCAGCATCTGGGGGCCCACGTGTGACGGCCTCGATCGCATTGTTGAGCGCTGTGGCTTG 2329186
Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241
|| ||| | || |||||||||||| | | ||||| |||||||| ||||||| | | |
Sbjct 2329187 CCCGAGATGCATGTGGGCGACTGGATGCTCTTTGAGAACATGGGTGCTTACACCGTCGCT 2329246
Query 21242 AGCTCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGC-ACTATGTTATTTCAG 21296
| |||| || || ||||| || ||| || | || | | ||||||| || ||||
Sbjct 2329247 GCCGCTTCTACTTTCAACGGATT-CCAGAGGCCGACCATCTACTATGTGATGTCAG 2329301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463501731203280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |