Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq717 141 2e-28 seq265 141 2e-28 seq808 136 8e-27 seq331 136 8e-27 seq298 132 9e-26 seq920 127 4e-24 seq647 127 4e-24 seq45 125 1e-23 seq376 122 2e-22 seq71 114 3e-20 seq210 111 3e-19 seq73 107 4e-18 seq170 91.5 3e-13 seq416 84.2 4e-11 >seq717 Length=839118 Score = 141 bits (156), Expect = 2e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 82588 CTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAA 82647 ||| || ||| || || ||||||||||| || |||||||| |||||| | || || ||| Sbjct 563447 CTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAG 563506 Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707 | | || || || || ||||| || ||||| || || || || || || || || | Sbjct 563507 TGCGGCCATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGC 563566 Query 82708 CTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767 | ||||| ||||| || || ||||| ||||| ||||| || ||| | || || || || | Sbjct 563567 CCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAA 563626 Query 82768 AAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || |||||||| |||| ||||| ||||| |||||||| Sbjct 563627 GTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669 >seq265 Length=2261556 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || || ||||| | | | | || ||||| ||||| Sbjct 841118 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 841059 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| ||||||| ||||| ||||| |||||||||||||| || ||||| Sbjct 841058 TTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 840999 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || ||||| ||||| || || | || || ||||| || || Sbjct 840998 GCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCGGTA 840939 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | || || || || |||||||| Sbjct 840938 AGGGTTTTCACGAAAATCTGCAT 840916 >seq808 Length=762264 Score = 136 bits (150), Expect = 8e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || || ||||| | || || ||||| ||||| Sbjct 448014 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATATGTCCATCTTCCAGTTGC 447955 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| |||||||| ||||| ||||| |||||||||||||| || ||||| Sbjct 447954 TTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 447895 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || ||||| ||||| || || | || || ||||| || || Sbjct 447894 GCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCAGTA 447835 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | || || | || |||||||| Sbjct 447834 AGGGTTTTCATGAAAATCTGCAT 447812 >seq331 Length=2147541 Score = 136 bits (150), Expect = 8e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || || ||||| | | | | || ||||| ||||| Sbjct 851444 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 851385 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| ||||||| ||||| ||||| |||||||||||||| || ||||| Sbjct 851384 TTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 851325 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || ||||| ||||| | | | || || ||||| || || Sbjct 851324 GCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTGATGGTCTTCCCGGTA 851265 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 || || || || || |||||||| Sbjct 851264 AAGGTTTTCACGAAAATCTGCAT 851242 >seq298 Length=2265018 Score = 132 bits (146), Expect = 9e-26 Identities = 168/229 (73%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| || ||| || || ||||||||||| || |||||||| ||||| || |||| Sbjct 584597 TACCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAG 584656 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | || || || || ||||| || |||| || || | || || || || | Sbjct 584657 --AGAGTGCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTG 584714 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| || || ||||| ||||| ||||| || ||| | || || | Sbjct 584715 GGATGCCCTCCTTGTCTTGGAT-TTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGA 584773 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || || |||||||| |||| ||||| ||||| ||||||| Sbjct 584774 CCTCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822 >seq920 Length=534542 Score = 127 bits (140), Expect = 4e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| | || || || || || || ||||| | | | | || ||||| ||||| Sbjct 150028 TGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 150087 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| |||||||| ||||| ||||| ||||||||||||| || ||||| Sbjct 150088 TTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATTCTGGATCTTG 150147 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| | ||||| ||||| || | | || || ||||| || || Sbjct 150148 GCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAGGGTGATGGTCTTCCCAGTA 150207 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | || || || || |||||||| Sbjct 150208 AGGGTTTTCACGAAAATCTGCAT 150230 >seq647 Length=1105866 Score = 127 bits (140), Expect = 4e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTT 82670 ||||| || || || || || || || ||||| | | | | || ||||| ||||| || Sbjct 850250 AGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTG 850191 Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730 |||| |||||| |||||||| ||||| ||||| |||||||||||||| || ||||| | Sbjct 850190 CCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACC 850131 Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790 ||||||||||| || ||||| ||||| | || | ||| | ||||| || || | | Sbjct 850130 TTTACATTTTCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGC 850071 Query 82791 GTCTTTACAAATATCTGCAT 82810 || | | || |||||||| Sbjct 850070 GTTTCCATGAAAATCTGCAT 850051 >seq45 Length=5545317 Score = 125 bits (138), Expect = 1e-23 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || | | || || ||||||||||| || |||||||| |||||||| || | Sbjct 1737670 TACCGCCCCACAGATGGAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTG 1737729 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTT-TTCCAGCAAAGATTAGTCTTTGTTGATCTGGA 82700 | ||| | ||| || || || |||| || |||| || || || || || || || Sbjct 1737730 AGAGAGTGTGACCATCCTCCAGCTGTTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGT 1737789 Query 82701 GGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 || || || ||||| ||||| || || ||||| ||||| ||| | || || ||| | Sbjct 1737790 GGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAGTGGTGTC---AGGCTTG 1737846 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || ||||||||||||| ||||| ||||| |||||||| Sbjct 1737847 ACCTCGAGTGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAAATCTGCAT 1737896 >seq376 Length=1527771 Score = 122 bits (134), Expect = 2e-22 Identities = 147/201 (73%), Gaps = 7/201 (3%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || || ||||| | | | || ||||| ||||| Sbjct 1196485 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCCAGTTGC 1196426 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||| |||||| |||||||| ||||| ||||| |||||||||||||| || Sbjct 1196425 TTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG------- 1196373 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || ||||| ||||| || |||| || || ||||| || || Sbjct 1196372 GCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCCAGGGTGATGGTCTTCCCAGTA 1196313 Query 82788 AACGTCTTTACAAATATCTGC 82808 | ||||| || || |||||| Sbjct 1196312 AGGGTCTTCACGAAAATCTGC 1196292 >seq71 Length=4921646 Score = 114 bits (126), Expect = 3e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| |||| || |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct 1110271 CCCTCTTCCAGTTACTTGCCAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1110330 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 |||| || ||||| || ||||||||||| || ||||| ||||| || | ||| Sbjct 1110331 TTATTCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCGTGAGAGTG 1110390 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| | || || || || || |||||||| Sbjct 1110391 ATGGTCTTCAGAGCCAGGGTTTTCACGAAAATCTGCAT 1110428 >seq210 Length=3024228 Score = 111 bits (122), Expect = 3e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| || ||||||||||| || | ||||| |||| || || | Sbjct 2224332 TACCACCCCACAGACGTAGTGTCAAGTGCAGAGTGGACTGTTTCTAGTTATTGTAGTCTG 2224391 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || || |||||||| || |||| | || | || || || || | Sbjct 2224392 AGAGAGTGTGGACATCCTCCAGTTGTTTGCCCACAAAAACCAGACACTGCTGGTCAGGTG 2224451 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| || || ||||| ||||| ||||| || ||| |||| || | Sbjct 2224452 GGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTAGGCTCGA 2224511 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | ||||| ||||||| |||| ||||| || || |||||||| Sbjct 2224512 CCTCGAGTGTTATGGTCTTGCTGGTCAGGGTCTTCACGAAGATCTGCAT 2224560 >seq73 Length=4601553 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||||||||| || |||||||| ||||| || | || ||| | || || Sbjct 4090085 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTGTAGGCTGAGAGAGT----CCATCC 4090030 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || ||||| ||| |||| || || | || || || || || || ||||| ||| Sbjct 4090029 TCCAGCTGTTTGCCAACAAAAATCAGATGCAGCTGGTCAGGTGGGATGCCCTCCTTGTCT 4089970 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || || ||||| ||||| | | | || ||| | || || || || | || || ||| Sbjct 4089969 TGGATTTTAGCTTTGACATTCTTAGTAGTGTCACTGGGCTCGACCTCGAGTGTGATGGTC 4089910 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| |||| |||| ||||| |||||||| Sbjct 4089909 TTGCCCGTCAGGGTCTACACAAAGATCTGCAT 4089878 >seq170 Length=2938728 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 60139 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGT 60198 |||||| | || | |||||||||| |||||||||||| || || || || || || || Sbjct 965592 GATAGCTGGTGCTCTGTGGTGGTACTTTATATCTAAAGGGATTGAGTATTTGGACACAGT 965533 Query 60199 GTTTTTCATACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTT 60258 |||||| || || ||||| || || || || ||| | ||||| || ||||| | Sbjct 965532 GTTTTTTATCCTGAGGAAGAAAAACAACCAAGTCTCTTTCCTTCACGTGTACCATCACTG 965473 Query 60259 TACTATGTTTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311 || |||||||| | | ||| | || ||||| ||| |||| || || |||| Sbjct 965472 CACAATGTTTACGCTGTGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACAAG 965420 >seq416 Length=1521731 Score = 84.2 bits (92), Expect = 4e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| ||||| || || | | || || || ||||| | | | | || || | ||||| Sbjct 880284 GTGAAGAGTGGACTCCTGTGGAATGTTGTAGTCAGACAAAGTGCGTCCCGCTGCCAGTTG 880343 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 | | ||||||||| | |||||||| ||| | ||||| |||||||||||| | || ||||| Sbjct 880344 TCTGCCAGCAAAGCTCAGTCTTTGCTGAACAGGAGGAATTCCTTCCTTAACCTGGATCTT 880403 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 | ||| ||||||| | ||| ||||| || || | ||| || || || || || Sbjct 880404 GACCTTTCCATTTTCTGTTGTACGCAAGGGTTCAACCTCGAGAGTAATGGTTTTTCCAGT 880463 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | || || | || || ||||| Sbjct 880464 AAGGGTTTTCATGAAAATTTGCAT 880487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981731959386569