Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq717 141 2e-28
seq265 141 2e-28
seq808 136 8e-27
seq331 136 8e-27
seq298 132 9e-26
seq920 127 4e-24
seq647 127 4e-24
seq45 125 1e-23
seq376 122 2e-22
seq71 114 3e-20
seq210 111 3e-19
seq73 107 4e-18
seq170 91.5 3e-13
seq416 84.2 4e-11
>seq717
Length=839118
Score = 141 bits (156), Expect = 2e-28
Identities = 165/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 82588 CTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAA 82647
||| || ||| || || ||||||||||| || |||||||| |||||| | || || |||
Sbjct 563447 CTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAG 563506
Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707
| | || || || || ||||| || ||||| || || || || || || || || |
Sbjct 563507 TGCGGCCATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGC 563566
Query 82708 CTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767
| ||||| ||||| || || ||||| ||||| ||||| || ||| | || || || || |
Sbjct 563567 CCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAA 563626
Query 82768 AAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || |||||||| |||| ||||| ||||| ||||||||
Sbjct 563627 GTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669
>seq265
Length=2261556
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || || || ||||| | | | | || ||||| |||||
Sbjct 841118 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 841059
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| ||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct 841058 TTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 840999
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||||| ||||| || || | || || ||||| || ||
Sbjct 840998 GCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCGGTA 840939
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| || || || || ||||||||
Sbjct 840938 AGGGTTTTCACGAAAATCTGCAT 840916
>seq808
Length=762264
Score = 136 bits (150), Expect = 8e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || || || ||||| | || || ||||| |||||
Sbjct 448014 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATATGTCCATCTTCCAGTTGC 447955
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| |||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct 447954 TTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 447895
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||||| ||||| || || | || || ||||| || ||
Sbjct 447894 GCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCAGTA 447835
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| || || | || ||||||||
Sbjct 447834 AGGGTTTTCATGAAAATCTGCAT 447812
>seq331
Length=2147541
Score = 136 bits (150), Expect = 8e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || || || ||||| | | | | || ||||| |||||
Sbjct 851444 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 851385
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| ||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct 851384 TTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 851325
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||||| ||||| | | | || || ||||| || ||
Sbjct 851324 GCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTGATGGTCTTCCCGGTA 851265
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
|| || || || || ||||||||
Sbjct 851264 AAGGTTTTCACGAAAATCTGCAT 851242
>seq298
Length=2265018
Score = 132 bits (146), Expect = 9e-26
Identities = 168/229 (73%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||| || ||| || || ||||||||||| || |||||||| ||||| || ||||
Sbjct 584597 TACCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAG 584656
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | || || || || ||||| || |||| || || | || || || || |
Sbjct 584657 --AGAGTGCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTG 584714
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||| ||||| || || ||||| ||||| ||||| || ||| | || || |
Sbjct 584715 GGATGCCCTCCTTGTCTTGGAT-TTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGA 584773
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || || || |||||||| |||| ||||| ||||| |||||||
Sbjct 584774 CCTCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822
>seq920
Length=534542
Score = 127 bits (140), Expect = 4e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| | || || || || || || ||||| | | | | || ||||| |||||
Sbjct 150028 TGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGC 150087
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| |||||||| ||||| ||||| ||||||||||||| || |||||
Sbjct 150088 TTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATTCTGGATCTTG 150147
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| | ||||| ||||| || | | || || ||||| || ||
Sbjct 150148 GCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAGGGTGATGGTCTTCCCAGTA 150207
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| || || || || ||||||||
Sbjct 150208 AGGGTTTTCACGAAAATCTGCAT 150230
>seq647
Length=1105866
Score = 127 bits (140), Expect = 4e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTT 82670
||||| || || || || || || || ||||| | | | | || ||||| ||||| ||
Sbjct 850250 AGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTG 850191
Query 82671 CCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT 82730
|||| |||||| |||||||| ||||| ||||| |||||||||||||| || ||||| |
Sbjct 850190 CCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACC 850131
Query 82731 TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAAC 82790
||||||||||| || ||||| ||||| | || | ||| | ||||| || || | |
Sbjct 850130 TTTACATTTTCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGC 850071
Query 82791 GTCTTTACAAATATCTGCAT 82810
|| | | || ||||||||
Sbjct 850070 GTTTCCATGAAAATCTGCAT 850051
>seq45
Length=5545317
Score = 125 bits (138), Expect = 1e-23
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || | | || || ||||||||||| || |||||||| |||||||| || |
Sbjct 1737670 TACCGCCCCACAGATGGAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTG 1737729
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTT-TTCCAGCAAAGATTAGTCTTTGTTGATCTGGA 82700
| ||| | ||| || || || |||| || |||| || || || || || || ||
Sbjct 1737730 AGAGAGTGTGACCATCCTCCAGCTGTTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGT 1737789
Query 82701 GGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760
|| || || ||||| ||||| || || ||||| ||||| ||| | || || ||| |
Sbjct 1737790 GGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAGTGGTGTC---AGGCTTG 1737846
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | || || ||||||||||||| ||||| ||||| ||||||||
Sbjct 1737847 ACCTCGAGTGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAAATCTGCAT 1737896
>seq376
Length=1527771
Score = 122 bits (134), Expect = 2e-22
Identities = 147/201 (73%), Gaps = 7/201 (3%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || || || ||||| | | | || ||||| |||||
Sbjct 1196485 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCCAGTTGC 1196426
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| |||| |||||| |||||||| ||||| ||||| |||||||||||||| ||
Sbjct 1196425 TTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG------- 1196373
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||||| ||||| || |||| || || ||||| || ||
Sbjct 1196372 GCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCCAGGGTGATGGTCTTCCCAGTA 1196313
Query 82788 AACGTCTTTACAAATATCTGC 82808
| ||||| || || ||||||
Sbjct 1196312 AGGGTCTTCACGAAAATCTGC 1196292
>seq71
Length=4921646
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| ||||| |||| || |||||||||||||||||||| ||||| ||||| |||||||||
Sbjct 1110271 CCCTCTTCCAGTTACTTGCCAGCAAAGATTAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1110330
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772
|||| || ||||| || ||||||||||| || ||||| ||||| || | |||
Sbjct 1110331 TTATTCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCGTGAGAGTG 1110390
Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| ||||| | || || || || || ||||||||
Sbjct 1110391 ATGGTCTTCAGAGCCAGGGTTTTCACGAAAATCTGCAT 1110428
>seq210
Length=3024228
Score = 111 bits (122), Expect = 3e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || ||| || ||||||||||| || | ||||| |||| || || |
Sbjct 2224332 TACCACCCCACAGACGTAGTGTCAAGTGCAGAGTGGACTGTTTCTAGTTATTGTAGTCTG 2224391
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || || |||||||| || |||| | || | || || || || |
Sbjct 2224392 AGAGAGTGTGGACATCCTCCAGTTGTTTGCCCACAAAAACCAGACACTGCTGGTCAGGTG 2224451
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||| ||||| || || ||||| ||||| ||||| || ||| |||| || |
Sbjct 2224452 GGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTAGGCTCGA 2224511
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | ||||| ||||||| |||| ||||| || || ||||||||
Sbjct 2224512 CCTCGAGTGTTATGGTCTTGCTGGTCAGGGTCTTCACGAAGATCTGCAT 2224560
>seq73
Length=4601553
Score = 107 bits (118), Expect = 4e-18
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || ||||||||||| || |||||||| ||||| || | || ||| | || ||
Sbjct 4090085 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTGTAGGCTGAGAGAGT----CCATCC 4090030
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| || ||||| ||| |||| || || | || || || || || || ||||| |||
Sbjct 4090029 TCCAGCTGTTTGCCAACAAAAATCAGATGCAGCTGGTCAGGTGGGATGCCCTCCTTGTCT 4089970
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|| || || ||||| ||||| | | | || ||| | || || || || | || || |||
Sbjct 4089969 TGGATTTTAGCTTTGACATTCTTAGTAGTGTCACTGGGCTCGACCTCGAGTGTGATGGTC 4089910
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| |||| |||| ||||| ||||||||
Sbjct 4089909 TTGCCCGTCAGGGTCTACACAAAGATCTGCAT 4089878
>seq170
Length=2938728
Score = 91.5 bits (100), Expect = 3e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 60139 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGT 60198
|||||| | || | |||||||||| |||||||||||| || || || || || || ||
Sbjct 965592 GATAGCTGGTGCTCTGTGGTGGTACTTTATATCTAAAGGGATTGAGTATTTGGACACAGT 965533
Query 60199 GTTTTTCATACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTT 60258
|||||| || || ||||| || || || || ||| | ||||| || ||||| |
Sbjct 965532 GTTTTTTATCCTGAGGAAGAAAAACAACCAAGTCTCTTTCCTTCACGTGTACCATCACTG 965473
Query 60259 TACTATGTTTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311
|| |||||||| | | ||| | || ||||| ||| |||| || || ||||
Sbjct 965472 CACAATGTTTACGCTGTGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACAAG 965420
>seq416
Length=1521731
Score = 84.2 bits (92), Expect = 4e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666
||| ||||| || || | | || || || ||||| | | | | || || | |||||
Sbjct 880284 GTGAAGAGTGGACTCCTGTGGAATGTTGTAGTCAGACAAAGTGCGTCCCGCTGCCAGTTG 880343
Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726
| | ||||||||| | |||||||| ||| | ||||| |||||||||||| | || |||||
Sbjct 880344 TCTGCCAGCAAAGCTCAGTCTTTGCTGAACAGGAGGAATTCCTTCCTTAACCTGGATCTT 880403
Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
| ||| ||||||| | ||| ||||| || || | ||| || || || || ||
Sbjct 880404 GACCTTTCCATTTTCTGTTGTACGCAAGGGTTCAACCTCGAGAGTAATGGTTTTTCCAGT 880463
Query 82787 CAACGTCTTTACAAATATCTGCAT 82810
| || || | || || |||||
Sbjct 880464 AAGGGTTTTCATGAAAATTTGCAT 880487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981731959386569
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |