Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq170 102 1e-16 >seq170 Length=2938728 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| | || | |||||||||| ||||||||||||||| || || || || ||||| Sbjct 965592 GATAGCTGGTGCTCTGTGGTGGTACTTTATATCTAAAGGGATTGAGTATTTGGACACAGT 965533 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 |||||| || || ||||| || || || || || || ||||| || ||||| | Sbjct 965532 GTTTTTTATCCTGAGGAAGAAAAACAACCAAGTCTCTTTCCTTCACGTGTACCATCACTG 965473 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || |||||||| | | ||| | || ||||| ||| ||||||| || || Sbjct 965472 CACAATGTTTACGCTGTGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACA 965422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903325703422560