Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 131 2e-25
seq717 114 1e-20
seq298 109 5e-19
seq45 102 8e-17
seq73 96.9 3e-15
seq56 96.9 3e-15
seq13 87.8 2e-12
seq265 84.2 2e-11
>seq5307
Length=1324
Score = 131 bits (144), Expect = 2e-25
Identities = 157/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| |||| |||||||||||||| ||||| || || | ||| | | | ||||| ||
Sbjct 934 AAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCA-TCCTCCAG 876
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| |||||||| |||| || ||||||||||| || |||||||| |||||||| |||
Sbjct 875 CTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGAT 816
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| || | ||||| ||||| ||||||| || || | |||| ||| ||||
Sbjct 815 -TTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTTGC 757
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| || || || || ||||||||
Sbjct 756 CCGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq717
Length=839118
Score = 114 bits (126), Expect = 1e-20
Identities = 148/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| ||||| | || | ||| | | | ||||| ||||| |||||
Sbjct 563473 GTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCA-TCCTCCAGCTGTTTGCC 563531
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581
|| |||| || |||||||||| || |||||||| |||||||| ||| ||| || |
Sbjct 563532 TGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGAT-TTTAGCTT 563590
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||||| ||||||| || || | |||| ||| ||||| ||||| |
Sbjct 563591 TGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTTGCCCGTCAGGG 563650
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 563651 TCTTCACAAAGATCTGCAT 563669
>seq298
Length=2265018
Score = 109 bits (120), Expect = 5e-19
Identities = 145/198 (73%), Gaps = 5/198 (3%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||||||||| ||||| || || | | || | ||||| ||||| ||||||
Sbjct 584629 GTGGACTCTTTCTGGATATTCTAGTCAGAGAGTGCGGCCA--TCCTCCAGCTGTTTGCCC 584686
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582
| |||| || ||||||||||| || |||||||| |||||||| || ||| || ||
Sbjct 584687 ACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGA--TTTAGCTTT 584744
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| ||||| ||||||| || || |||| ||| ||||| ||||| ||
Sbjct 584745 GACATTCTCAATAGTGTCACTGGGCTCGACCTCAGGTGTGATGGTCTTGCCCGTCAGGGT 584804
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || |||||||
Sbjct 584805 CTTCACAAAGGTCTGCAT 584822
>seq45
Length=5545317
Score = 102 bits (112), Expect = 8e-17
Identities = 147/200 (74%), Gaps = 8/200 (4%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| ||||| || || | ||| ||| | ||||| ||||| | |||
Sbjct 1737702 GTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCA-TCCTCCAGCTGTTGGCC 1737760
Query 133523 CG-CGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| | |||| || | ||||||||| || |||||||| |||||||| ||| ||| |||
Sbjct 1737761 CCACAAAAATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGAT-TTTAGCT 1737819
Query 133582 T-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
| || | |||| ||||| | ||| || |||| |||| ||| ||||| |||||
Sbjct 1737820 TTGACATTCTCAGTGGTGTCAG---GCTTGACCTCGAGTGTGATGGTCTTGCCTGTCAGG 1737876
Query 133641 GTTTTTACGAAAATCTGCAT 133660
|| || || |||||||||||
Sbjct 1737877 GTCTTCACAAAAATCTGCAT 1737896
>seq73
Length=4601553
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/198 (72%), Gaps = 6/198 (3%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||||||||| |||||||| || | | | | ||||| ||||| |||||
Sbjct 4090070 GTGGACTCTTTCTGGATATTGTA--GGCTGAGAGAGTCC--ATCCTCCAGCTGTTTGCCA 4090015
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582
| |||| || || ||||||| || |||||||| |||||||| ||| ||| || ||
Sbjct 4090014 ACAAAAATCAGATGCAGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGAT-TTTAGCTTT 4089956
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||| ||||||| || |||| |||| ||| ||||| ||||| ||
Sbjct 4089955 GACATTCTTAGTAGTGTCACTGGGCTCGACCTCGAGTGTGATGGTCTTGCCCGTCAGGGT 4089896
Query 133643 TTTTACGAAAATCTGCAT 133660
| || || ||||||||
Sbjct 4089895 CTACACAAAGATCTGCAT 4089878
>seq56
Length=5443799
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/211 (71%), Gaps = 14/211 (7%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | |||||||||||||| ||||| || || || || ||||| ||
Sbjct 2722513 AAGTGCAGGGTGGACTCTTTCTAGATATTATAGTC--------TGAGAGATATCCTCCAG 2722564
Query 133514 CTGCTTGCCCGCGTAAATGA---GCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGT 133570
||| ||||| || |||| | || |||||||||| || || ||||| ||||||||
Sbjct 2722565 CTGTTTGCCTGCAAAAATCAGATGCTGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTG 2722624
Query 133571 GATCTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTT 133629
||| ||| |||| | | | ||| | ||||| ||||||| || || | |||| ||| |
Sbjct 2722625 GAT-TTTAGCTTTAACATTCTCCATGGTGTCACTGGGCTCAACCTCCAGTGTGATGGTCT 2722683
Query 133630 TGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| |||||||| || || || ||| ||||
Sbjct 2722684 TGCCCGTCAGAGTCTTCACAAAGATCCGCAT 2722714
>seq13
Length=8615514
Score = 87.8 bits (96), Expect = 2e-12
Identities = 146/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATC-GCCCATCGTGGACGAGTCCTCGAG 133513
|| || | ||||||||||||| | ||||| || || | | ||| | |||| ||
Sbjct 1044043 AAGTGCAGGGTGGACTCTTTCAGGATATTATAGTCTGAGAAGAGTGCAGCCATCCTACAG 1044102
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|| ||||| || | || || |||||||||| | ||| |||| |||||||| |||
Sbjct 1044103 CTATTTGCCTGCCAATATCAGGTGCTGCTGGTCAGATGGGGTGCC-TCCTTGTCTTGGAT 1044161
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || |||| | ||||| ||||| ||||||| || || | |||| ||| ||||
Sbjct 1044162 -TTTAGCTTTGACATTCTCAATAGTGTCCCTGGGCTCAACCTCAAGTGTGATGGTCTTGC 1044220
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGC 133658
| ||||| || || || || ||||||
Sbjct 1044221 CCGTCAGGGTCTTCACAAAGATCTGC 1044246
>seq265
Length=2261556
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || ||||| || || || | | | || || || ||||||||
Sbjct 841112 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCC 841054
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | | ||||| || ||||| || |||||||| || |||||| |||
Sbjct 841053 AGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 840994
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || | ||| || || |||| ||||| ||| || ||||| || ||
Sbjct 840993 TACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCGGTAAGGGT 840934
Query 133643 TTTTACGAAAATCTGCAT 133660
||| ||||||||||||||
Sbjct 840933 TTTCACGAAAATCTGCAT 840916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483375050264040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |