Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq125 262 5e-65
seq177 188 8e-43
>seq125
Length=3779757
Score = 262 bits (290), Expect = 5e-65
Identities = 622/933 (67%), Gaps = 19/933 (2%)
Strand=Plus/Minus
Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118
|||||| ||||| | |||| ||| || | |||||||| || || | ||| ||
Sbjct 18650 CCAGGGCTTTATGCCTCAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCGATGTCTG 18591
Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178
|| ||||| || || |||| ||| ||| | | || ||||| || | || || |
Sbjct 18590 TGTCAAACTTATTGGCAAACAAGTGGTGCATGCGC---AACATCCAGTTCAAGTCACCTG 18534
Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238
||| || || |||||||| ||||| || |||||| |||| ||||| || |||| || |
Sbjct 18533 CTCCAAAAACACACACGGAGCGCACATGGACGCCGTTGCAGGGCGGGTAGGGGGCGCCCT 18474
Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298
| ||||| || || |||| |||||||| || ||||||| || || ||||||||||
Sbjct 18473 TGGAAACATCACCTTCAAAGTACTGCCACTTGACAAACCTAGCAATTGCATGCATGTCGG 18414
Query 162299 AGGTGTCGTACTTGTACACTGACGG-CACGGCTCCAGGAACACCCGGCAGTCTCTGTAGA 162357
| |||| ||||| | || | || || | ||| || || | || | ||||| | |
Sbjct 18413 ACATGTCATACTTATGG-CTTAGGGACAGTGATCCTGGGACTTCAGGGATCCTCTGAATA 18355
Query 162358 GTAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTG 162417
|| ||||| || | || ||||| || || || || || | ||||||||| |||| |
Sbjct 18354 GTGGCCCAGAGATACTCATCTGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTTTGG 18295
Query 162418 ACCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTA 162477
| ||| || | ||| | ||| || || ||| | || | ||| || || ||
Sbjct 18294 ATTTTTTCATTCTCTAGCACGTACTCCACATATTTCCTACTGACCACAAAATAGGCACTG 18235
Query 162478 CCAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACC 162537
|| ||||||| ||| | | |||||| | |||||| || ||||| | |
Sbjct 18234 CCTGAAAACAGAGGTGTTTCAAGAGGAGGCTGTAGTTTGTCAGTCCCTGTGTTTGTCAGC 18175
Query 162538 ATTCCCTCTACGACCACGTGTCTC----TTCCTCCACCTGGCCATCTTACTGGTAGACGG 162593
|||| | || || ||| | || ||||||| | | ||| ||| | |
Sbjct 18174 TTTCCATTAACAAC----TGTATAATGTTTTTTCCACCTTTCTTTTTTATTGGATGGCAT 18119
Query 162594 GTGTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAG 162653
| || || || ||| |||| ||| | | ||| || | | || || || ||
Sbjct 18118 TTTCTCAGTTTCGAGATTGTTTTCTCCCATTAGTGACTTGAGTTTCCTGACAATTTCCAG 18059
Query 162654 ATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCT 162713
||||| |||| ||||| || | ||||| ||||| || | || ||||| | | ||
Sbjct 18058 GTTGGTTTTAATAGGAAAATCCATACCGCAAAGATTTATCAAGTACTTCCAATCTGCACT 17999
Query 162714 GAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTA 162773
| || ||| || ||||| | |||||| ||||| ||||| || ||||||||||| || ||
Sbjct 17998 CATTCTGTAGAGGTCCTGCATACAGTTGAGATCAGCCTGAACCCGACTCCACGATGCATA 17939
Query 162774 CACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCAT 162833
||| ||| |||||| | | |||| ||||||||||| |||||| || | || || ||
Sbjct 17938 CACCACGGTCTCCAGCTGACTGGCCACAAAGACATTACTGAAACAGGATGCAATGCCAAT 17879
Query 162834 CACGGCCAGTGAGAA---CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATT 162890
||| | ||| | || ||| || | ||| | || || || | ||| || | |||
Sbjct 17878 CACTG-CAGCCAAAAAGGAATC--CTCTGATTTTTTGTCCACATGAATGCAATAGAAATT 17822
Query 162891 CTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCAC 162950
|||||| |||||||||| ||| | || || ||||| || ||||| || || |||||
Sbjct 17821 CTGAGGCATATAGATGGCCCGCAGGAGCCTGTCAAACATTTCAATCTTGTGATGAACCAC 17762
Query 162951 GATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983
|| ||||| ||||| || |||| ||||| ||
Sbjct 17761 TATGGAATATGCTATTGGAAACTTTGCCTCTTC 17729
>seq177
Length=2932736
Score = 188 bits (208), Expect = 8e-43
Identities = 235/322 (73%), Gaps = 0/322 (0%)
Strand=Plus/Plus
Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830
|| |||| || || |||| | || || | || ||||| ||||| ||||| || | |
Sbjct 2837910 CAAAGAGAGTGAGGCAGGCTATTCCTGAGACCTTCCCGGAACCAAAGGTATTGAAGAGGC 2837969
Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890
|| || |||| || || ||||||| |||||||||||| || || | || || || ||
Sbjct 2837970 ACTTATAACACCCCTCATCCTCCAGGGTGGTGTTCCAGAAGGTAATGGTTGAGTTCTGGA 2838029
Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950
|||| || | || ||||| | | |||||| || | || |||||| ||||| || ||
Sbjct 2838030 GTCCCAGCTCAGTGATGTTGATCTTGTCCTTATAGGCAGCCTGGACCACAACCCCATGGG 2838089
Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010
||| |||||| || |||||||||| ||||| | |||||| || |||||||| || || |
Sbjct 2838090 TCTTGCTGAAGGTCACCATGTTTTCTGGGCTTGCAGCCTTGATTTTCTGCCATGTCACAA 2838149
Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070
|| ||||| | | |||| |||||||||| ||| |||||||||||||||| | |
Sbjct 2838150 CCAAGACTTCCTGGGAAGTTTCCAGAGAGCATCGTAAGGAAGCAGGTGTGTTCAGCAGCT 2838209
Query 172071 CCCTTTCGTCTTGCGTTACCAC 172092
|||| ||||| || |||||
Sbjct 2838210 TTTTTTCATCTTGGGTCACCAC 2838231
Score = 127 bits (140), Expect = 2e-24
Identities = 180/251 (72%), Gaps = 9/251 (4%)
Strand=Plus/Plus
Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562
|||||||| |||| || || |||||||||| ||| | || | ||| ||||||||||
Sbjct 2836704 ACAGTTTGCCTGAAGTTGGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCT-- 2836761
Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622
||||||| ||||| || || ||||| || || || | || | |||||||| |||||
Sbjct 2836762 -TTCCCACCTGACTCTTGGGGTCTTTGACATGGAGGACACTGATGACAGATGTGGTCCCA 2836820
Query 171623 TTACGATGT---AGAACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAA 171679
|| | ||| |||| | | ||||| || || ||||| ||||| | ||| |||||
Sbjct 2836821 TTGGGGTGTGAGAGAA---TCTCTGTACTGTTGTCCATTCCTGATCCAGAAACCTTCCAG 2836877
Query 171680 AATATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTAATCCATCTTCGAAG 171739
| || |||| ||||| | || | ||||||||||| || |||| ||||| |||
Sbjct 2836878 GAGATCGCAGGTGCTGGGCGGGCGTTGGCAGAGCAAGTGATATTTAGGTGGTCTTCAAAG 2836937
Query 171740 AACTCATAGTG 171750
|| | ||||||
Sbjct 2836938 AATTTATAGTG 2836948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578377258641600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |