Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 118 7e-22
seq717 100 2e-16
>seq5307
Length=1324
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||| || ||| | |||||| ||||||||| |||||| || || || || || ||
Sbjct 956 ACCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGA 897
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| | || |||| ||||| || |||||||||| ||||||||| || | ||
Sbjct 896 GAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 837
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| || || ||||| ||||| ||| ||| ||| ||||| || | || |
Sbjct 836 GATGCCCTCCTTGTCTTGGATTTTAGCTTTGG-CATTCTCAATAGTGTCACTGGGCTCGA 778
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| |||| ||||| || || || || | || || ||||||||||||||
Sbjct 777 CCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq717
Length=839118
Score = 100 bits (110), Expect = 2e-16
Identities = 162/229 (71%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||| || || ||| | |||||| || |||||| |||||| || || || | || ||
Sbjct 563443 ACCAC-TCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGA 563501
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| | || |||| ||||| || |||||||||| | ||||||| || | ||
Sbjct 563502 GAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGG 563561
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| || || ||||| ||||| ||| | ||| ||| ||||| || | || |
Sbjct 563562 GATGCCCTCCTTGTCTTGGATTTTAGCTTTGA-CATTCTCAATAGTGTCACTGGGCTCGA 563620
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| |||| ||||| || || || || | || || ||||||||||||||
Sbjct 563621 CCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328673669968320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |