Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq265 120 7e-22
seq808 114 3e-20
seq331 111 4e-19
seq920 105 2e-17
seq376 98.7 2e-15
seq647 95.1 3e-14
>seq265
Length=2261556
Score = 120 bits (132), Expect = 7e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || ||||| | || || ||| || || ||| | |||
Sbjct 840931 AAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCCTCGGATACAATAGAAAAT 840990
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || || || ||||||||| || || ||||||| |||||
Sbjct 840991 GTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACCGATCTTT 841050
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | |||||| | || |||||| | || || |||||
Sbjct 841051 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTCC 841110
Query 206365 ACTCTTCACCTTGTTTTGAGACTT 206388
|||||||| ||||| |||||||||
Sbjct 841111 ACTCTTCATCTTGTGTTGAGACTT 841134
Score = 91.5 bits (100), Expect = 3e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 204754 AAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCT 204813
||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| |
Sbjct 841134 AAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACG 841075
Query 204814 TCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||||||| ||||| || || ||||| | | ||| |||
Sbjct 841074 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGA 841032
>seq808
Length=762264
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || ||||| | || || ||| || || ||| | |||
Sbjct 447827 AAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCAGATACAATAGAAAAT 447886
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || || || ||||||||| || || |||||||| |||||
Sbjct 447887 GTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTT 447946
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | ||| | || |||||| | || || |||||
Sbjct 447947 GCTGGCAAGCAACTGGAAGATGGACATATCTTGTCTGACTACAACATTCAAAAGGAGTCC 448006
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||||| |||||||||||
Sbjct 448007 ACTCTTCATCTTGTGTTGAGACTTCG 448032
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||||||| ||||| |||||||| ||||| || || | || ||||||| ||| |
Sbjct 448032 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATA 447973
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||||||| ||||| || || ||||| || | ||| |||
Sbjct 447972 TGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGA 447928
>seq331
Length=2147541
Score = 111 bits (122), Expect = 4e-19
Identities = 123/164 (75%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 206227 TCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGAC 206286
|| || ||| | ||| |||||| ||||| || || || ||||||||| || ||
Sbjct 851299 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 851358
Query 206287 GCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTAC 206346
||||||| ||||| || || ||||| ||||||||||| | |||||| | || |||
Sbjct 851359 CAGCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 851418
Query 206347 AACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||| | || || ||||| |||||||| ||||| |||||||||||
Sbjct 851419 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCG 851462
Score = 95.1 bits (104), Expect = 3e-14
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||||||| ||||| |||||||| ||||| || || | || ||||||| ||||||
Sbjct 851462 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 851403
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| |||||||||||| ||||| || || ||||| | | ||| |||
Sbjct 851402 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGA 851358
>seq920
Length=534542
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || ||||| | | || ||| || || ||| |||
Sbjct 150215 AAAACCCTTACTGGGAAGACCATCACCCTCAAGGTTGAACCCTCGGATACAAAAGAAAAT 150156
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || | || ||||||||| || || |||||||| |||||
Sbjct 150155 GTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTT 150096
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | |||||| | || |||||| | || || ||||
Sbjct 150095 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTTC 150036
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| |||| |||||||||||
Sbjct 150035 ACTCTTCATCTTGGGTTGAGACTTCG 150010
Score = 91.5 bits (100), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||||||| |||| |||||||| |||| || || | || ||||||| ||||||
Sbjct 150010 CGAAGTCTCAACCCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 150069
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| |||||||||||| ||||| || || ||||| || | ||| |||
Sbjct 150070 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGA 150114
>seq376
Length=1527771
Score = 98.7 bits (108), Expect = 2e-15
Identities = 145/206 (70%), Gaps = 7/206 (3%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| || ||| || || ||| | |||
Sbjct 1196305 AAGACCCTTACTGGGAAGACCATCACCCTGGAGGTTGAACCCTCGGATACAATAGAAAAT 1196364
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| | ||| || ||||||||| || || |||||||| |||||
Sbjct 1196365 GTAAAGGCCAGGAT-------AAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTT 1196417
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
| || ||||| ||||||||||| |||||| | || |||||| | || || |||||
Sbjct 1196418 ACTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAACATTCAAAAGGAGTCC 1196477
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||||| |||||||||||
Sbjct 1196478 ACTCTTCATCTTGTGTTGAGACTTCG 1196503
Score = 91.5 bits (100), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||||||| ||||| |||||||| ||||| || || | || ||||||| ||||||
Sbjct 1196503 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 1196444
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||||||| ||||| || | ||||| || | ||| |||
Sbjct 1196443 TGTCCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGA 1196399
>seq647
Length=1105866
Score = 95.1 bits (104), Expect = 3e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 206186 AAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAG 206245
||||||| || || || || ||||| | || | ||| || || ||| | ||| |
Sbjct 850067 AAACGCTTACTGGGAAGACCGTCACTCTTGAGGCTGAACCCTCAGATACAATAGAAAATG 850126
Query 206246 TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCG 206305
||||| ||||| || || || ||||||||| || || |||||||| |||||
Sbjct 850127 TAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTA 850186
Query 206306 CCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTA 206365
| || ||||| ||||||||||| | |||||| | || |||||| | || || ||||| |
Sbjct 850187 CTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAACATTCAAAAGGAGTCCA 850246
Query 206366 CTCTT 206370
|||||
Sbjct 850247 CTCTT 850251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181706159319891
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |