Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq265 120 7e-22 seq808 114 3e-20 seq331 111 4e-19 seq920 105 2e-17 seq376 98.7 2e-15 seq647 95.1 3e-14 >seq265 Length=2261556 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || ||||| | || || ||| || || ||| | ||| Sbjct 840931 AAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCCTCGGATACAATAGAAAAT 840990 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||||||| || || ||||||| ||||| Sbjct 840991 GTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACCGATCTTT 841050 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | |||||| | || |||||| | || || ||||| Sbjct 841051 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTCC 841110 Query 206365 ACTCTTCACCTTGTTTTGAGACTT 206388 |||||||| ||||| ||||||||| Sbjct 841111 ACTCTTCATCTTGTGTTGAGACTT 841134 Score = 91.5 bits (100), Expect = 3e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 204754 AAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCT 204813 ||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| | Sbjct 841134 AAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACG 841075 Query 204814 TCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||||| ||||| || || ||||| | | ||| ||| Sbjct 841074 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGA 841032 >seq808 Length=762264 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || ||||| | || || ||| || || ||| | ||| Sbjct 447827 AAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCAGATACAATAGAAAAT 447886 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||||||| || || |||||||| ||||| Sbjct 447887 GTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTT 447946 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | ||| | || |||||| | || || ||||| Sbjct 447947 GCTGGCAAGCAACTGGAAGATGGACATATCTTGTCTGACTACAACATTCAAAAGGAGTCC 448006 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 448007 ACTCTTCATCTTGTGTTGAGACTTCG 448032 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || ||||||| ||| | Sbjct 448032 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATA 447973 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||||| ||||| || || ||||| || | ||| ||| Sbjct 447972 TGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGA 447928 >seq331 Length=2147541 Score = 111 bits (122), Expect = 4e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 206227 TCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGAC 206286 || || ||| | ||| |||||| ||||| || || || ||||||||| || || Sbjct 851299 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 851358 Query 206287 GCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTAC 206346 ||||||| ||||| || || ||||| ||||||||||| | |||||| | || ||| Sbjct 851359 CAGCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 851418 Query 206347 AACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| | || || ||||| |||||||| ||||| ||||||||||| Sbjct 851419 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCG 851462 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| Sbjct 851462 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 851403 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||||||| ||||| || || ||||| | | ||| ||| Sbjct 851402 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGA 851358 >seq920 Length=534542 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || ||||| | | || ||| || || ||| ||| Sbjct 150215 AAAACCCTTACTGGGAAGACCATCACCCTCAAGGTTGAACCCTCGGATACAAAAGAAAAT 150156 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || | || ||||||||| || || |||||||| ||||| Sbjct 150155 GTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTT 150096 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | |||||| | || |||||| | || || |||| Sbjct 150095 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTTC 150036 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| |||| ||||||||||| Sbjct 150035 ACTCTTCATCTTGGGTTGAGACTTCG 150010 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| |||| |||||||| |||| || || | || ||||||| |||||| Sbjct 150010 CGAAGTCTCAACCCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 150069 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||||||| ||||| || || ||||| || | ||| ||| Sbjct 150070 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGA 150114 >seq376 Length=1527771 Score = 98.7 bits (108), Expect = 2e-15 Identities = 145/206 (70%), Gaps = 7/206 (3%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| || ||| || || ||| | ||| Sbjct 1196305 AAGACCCTTACTGGGAAGACCATCACCCTGGAGGTTGAACCCTCGGATACAATAGAAAAT 1196364 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| | ||| || ||||||||| || || |||||||| ||||| Sbjct 1196365 GTAAAGGCCAGGAT-------AAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTT 1196417 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 | || ||||| ||||||||||| |||||| | || |||||| | || || ||||| Sbjct 1196418 ACTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAACATTCAAAAGGAGTCC 1196477 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 1196478 ACTCTTCATCTTGTGTTGAGACTTCG 1196503 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| Sbjct 1196503 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 1196444 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||||| ||||| || | ||||| || | ||| ||| Sbjct 1196443 TGTCCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGA 1196399 >seq647 Length=1105866 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 206186 AAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAG 206245 ||||||| || || || || ||||| | || | ||| || || ||| | ||| | Sbjct 850067 AAACGCTTACTGGGAAGACCGTCACTCTTGAGGCTGAACCCTCAGATACAATAGAAAATG 850126 Query 206246 TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCG 206305 ||||| ||||| || || || ||||||||| || || |||||||| ||||| Sbjct 850127 TAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTA 850186 Query 206306 CCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTA 206365 | || ||||| ||||||||||| | |||||| | || |||||| | || || ||||| | Sbjct 850187 CTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAACATTCAAAAGGAGTCCA 850246 Query 206366 CTCTT 206370 ||||| Sbjct 850247 CTCTT 850251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181706159319891