Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq652 113 1e-21
seq469 98.7 3e-17
seq254 98.7 3e-17
seq129 98.7 3e-17
seq276 95.1 4e-16
seq6675 93.3 1e-15
>seq652
Length=1029911
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 610875 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 610934
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 610935 CCGGGTTTCAGC 610946
>seq469
Length=1537487
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1490579 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1490520
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1490519 CCGGGTTTCGGC 1490508
>seq254
Length=2661173
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1983774 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1983833
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1983834 CCGGGTTTCGGC 1983845
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1990650 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1990709
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1990710 CCGGGTTTCGGC 1990721
>seq129
Length=3840824
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 541562 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 541621
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 541622 CCGGGTTTCGGC 541633
>seq276
Length=2291703
Score = 95.1 bits (104), Expect = 4e-16
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835
|||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |
Sbjct 674246 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCGGGTT 674305
Query 2836 TCAGC 2840
|| ||
Sbjct 674306 TCGGC 674310
>seq6675
Length=1058
Score = 93.3 bits (102), Expect = 1e-15
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| ||||||||||||||| || |||||||||||| ||||||||||||||||| |
Sbjct 341 TGGCCGAAATAGCTCAGTTGGGAGCGCGTTAGACTGAAGACCTAAAGGTCCCTGGTTCGA 282
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 281 TCCCGGGTTTCGGC 268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848287529295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |