Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq808 102 7e-17 seq331 98.7 9e-16 seq265 98.7 9e-16 seq5307 95.1 1e-14 seq920 89.7 5e-13 >seq808 Length=762264 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | || |||||||||||||||||| || | | Sbjct 448038 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 447979 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||| | | | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 447978 AAGATATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 447919 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | || || | ||| ||| Sbjct 447918 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACC 447859 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || || || | ||||||| || |||||||| ||| Sbjct 447858 TCGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCATCCTG 447808 >seq331 Length=2147541 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | || |||||||||||||||||| || | | Sbjct 851468 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 851409 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| ||| | ||||| || | |||| Sbjct 851408 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGA 851349 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | || || | ||| || Sbjct 851348 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCC 851289 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | | ||||| || || || || || |||||||| || |||||||| Sbjct 851288 TTGAGGGTGATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCAT 851242 >seq265 Length=2261556 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||| | |||||||| | ||| | || |||||||||||||||||| || | | Sbjct 841142 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 841083 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| ||| | ||||| || | |||| Sbjct 841082 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGA 841023 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | || || | ||| ||| Sbjct 841022 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 840963 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | |||||||| || |||||||| Sbjct 840962 TCGAGGGTGATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916 >seq5307 Length=1324 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/216 (71%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| |||| || ||| || || || || || || | | || || | || || Sbjct 938 CACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTC 879 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||| || |||||||| |||| ||||||||||| | || | || ||||||||| Sbjct 878 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 819 Query 35647 GATCTTTTGCTTCAG-AGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||| ||| |||| | | | | | ||||| || | || ||||| | ||||| || | Sbjct 818 GAT-TTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCT 760 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT-TCTG 35740 | ||||||| || |||||||| |||||||| |||| Sbjct 759 TGCCCGTCAGGGTCTTCACAAAGATCTGCATCTCTG 724 >seq920 Length=534542 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||| | | ||| | || |||||||||||||||||| || | | Sbjct 150004 CCACCACGAAGTCTCAACCCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGAC 150063 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 150064 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 150123 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| | | |||||| ||| | | || | || || | ||| ||| Sbjct 150124 ATTCCTTCCTTATTCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACC 150183 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | | ||||| || || || || | |||||||| || |||||||| Sbjct 150184 TTGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 150230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450750938020680