Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_026601.1 Length=37238 Score E Sequences producing significant alignments: (Bits) Value seq5790 113 1e-20 >seq5790 Length=1233 Score = 113 bits (124), Expect = 1e-20 Identities = 176/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 14139 GAGGCGATCAAGGCGGAGCTGGAGTTCAACCCGCGCCT--GGCCATGGACTTCCCCCAGG 14196 ||||| || ||||| |||||| ||||||||| || || | ||| ||||| | | Sbjct 302 GAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTTCGGTC--GGATTTCCCGGATG 359 Query 14197 GCGCCGGCAAGGGCCGCGTCTGGCAGGTCGGCACCATCGTTACGGCGAACGATGCCAAGG 14256 ||||||||| || ||||||| | ||| || |||| | | | | | | Sbjct 360 CGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTATTACCCGTACCAACGTAATGA 419 Query 14257 TCCAGGTCTTCGGCTCCGGCAAGCGGATGCGCGGCCTTCGACACGGCCCGCACCGTCCTG 14316 ||| || | ||||| ||||| || | |||||||| | |||||||| || |||| || | Sbjct 420 TCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCGACACGGTCCATACCGACCCG 479 Query 14317 ACCTGGTGATCGGCGACGACCTGGAGAACGACGAGAACGTCCGCAGCCCGGAGCAGCGCG 14376 |||| ||||| ||||||||||||||||||||| |||||| ||||| ||||| | Sbjct 480 ACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGTCCGCGTGCCGGATCAGCGGG 539 Query 14377 ACAAGCTGGA 14386 |||| |||| Sbjct 540 ACAAATTGGA 549 Score = 104 bits (114), Expect = 6e-18 Identities = 189/272 (69%), Gaps = 10/272 (4%) Strand=Plus/Plus Query 14793 ATCACGTTCTGGGTCAACCGCCTGGCGCAGTGGATGT--TCTA---CGGCGCGTGCGACC 14847 ||| ||||||||||| | | | |||| | |||| | |||| ||| ||| ||| | Sbjct 879 ATCTCGTTCTGGGTCGA--GAC--GCGCCG-GGATCTCGTCTATTTCGGGGCGATCGATC 933 Query 14848 CGTCCCTGGGTAAGCAAGGCTCCAGTCGCGACCCCAGCGCCATCCTGGTGGGTGGGTTCA 14907 |||| || || |||| | || || ||||| |||||||||| | |||||| | Sbjct 934 CGTCGCTCGGAAAGCGGAACAAGAGCCGTGACCCATCCGCCATCCTGATCGGTGGGATGG 993 Query 14908 ATCGGGAAACAGGCGTCCTGGACGTGGTCGAGGCTGCCATCCGCAAGCGCCTGCCGGACA 14967 | ||| || ||| |||||||||||||||| | |||||| || |||||||||| Sbjct 994 ACCGGCTGACCGGCAAGATGGACGTGGTCGAGGCATCAATCCGCCGCCGTCTGCCGGACA 1053 Query 14968 AGATCATCGAGGACATCATCACCATGCAGCGGGCCTATCACTGCCTGGTGTGGGGCGTTG 15027 |||||||| ||| | |||| | | ||||| | |||| || || ||||| ||| | Sbjct 1054 TGATCATCGCGGATACCATCGCGCTTCAGCGAGAGTATCGGTGTCTCTTGTGGTTCGTGG 1113 Query 15028 AGGCGGTCCAGTTCCAGGAGTTTCTGCGCACC 15059 | ||||||||||||| || ||| | ||| Sbjct 1114 AAAGCATCCAGTTCCAGGAATTCCTGAGGACC 1145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119029297634400