Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_026601.1
Length=37238
Score E
Sequences producing significant alignments: (Bits) Value
seq5790 113 1e-20
>seq5790
Length=1233
Score = 113 bits (124), Expect = 1e-20
Identities = 176/250 (70%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 14139 GAGGCGATCAAGGCGGAGCTGGAGTTCAACCCGCGCCT--GGCCATGGACTTCCCCCAGG 14196
||||| || ||||| |||||| ||||||||| || || | ||| ||||| | |
Sbjct 302 GAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTTCGGTC--GGATTTCCCGGATG 359
Query 14197 GCGCCGGCAAGGGCCGCGTCTGGCAGGTCGGCACCATCGTTACGGCGAACGATGCCAAGG 14256
||||||||| || ||||||| | ||| || |||| | | | | | |
Sbjct 360 CGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTATTACCCGTACCAACGTAATGA 419
Query 14257 TCCAGGTCTTCGGCTCCGGCAAGCGGATGCGCGGCCTTCGACACGGCCCGCACCGTCCTG 14316
||| || | ||||| ||||| || | |||||||| | |||||||| || |||| || |
Sbjct 420 TCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCGACACGGTCCATACCGACCCG 479
Query 14317 ACCTGGTGATCGGCGACGACCTGGAGAACGACGAGAACGTCCGCAGCCCGGAGCAGCGCG 14376
|||| ||||| ||||||||||||||||||||| |||||| ||||| ||||| |
Sbjct 480 ACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGTCCGCGTGCCGGATCAGCGGG 539
Query 14377 ACAAGCTGGA 14386
|||| ||||
Sbjct 540 ACAAATTGGA 549
Score = 104 bits (114), Expect = 6e-18
Identities = 189/272 (69%), Gaps = 10/272 (4%)
Strand=Plus/Plus
Query 14793 ATCACGTTCTGGGTCAACCGCCTGGCGCAGTGGATGT--TCTA---CGGCGCGTGCGACC 14847
||| ||||||||||| | | | |||| | |||| | |||| ||| ||| ||| |
Sbjct 879 ATCTCGTTCTGGGTCGA--GAC--GCGCCG-GGATCTCGTCTATTTCGGGGCGATCGATC 933
Query 14848 CGTCCCTGGGTAAGCAAGGCTCCAGTCGCGACCCCAGCGCCATCCTGGTGGGTGGGTTCA 14907
|||| || || |||| | || || ||||| |||||||||| | |||||| |
Sbjct 934 CGTCGCTCGGAAAGCGGAACAAGAGCCGTGACCCATCCGCCATCCTGATCGGTGGGATGG 993
Query 14908 ATCGGGAAACAGGCGTCCTGGACGTGGTCGAGGCTGCCATCCGCAAGCGCCTGCCGGACA 14967
| ||| || ||| |||||||||||||||| | |||||| || ||||||||||
Sbjct 994 ACCGGCTGACCGGCAAGATGGACGTGGTCGAGGCATCAATCCGCCGCCGTCTGCCGGACA 1053
Query 14968 AGATCATCGAGGACATCATCACCATGCAGCGGGCCTATCACTGCCTGGTGTGGGGCGTTG 15027
|||||||| ||| | |||| | | ||||| | |||| || || ||||| ||| |
Sbjct 1054 TGATCATCGCGGATACCATCGCGCTTCAGCGAGAGTATCGGTGTCTCTTGTGGTTCGTGG 1113
Query 15028 AGGCGGTCCAGTTCCAGGAGTTTCTGCGCACC 15059
| ||||||||||||| || ||| | |||
Sbjct 1114 AAAGCATCCAGTTCCAGGAATTCCTGAGGACC 1145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119029297634400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |