Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq265 111 2e-19 seq808 109 6e-19 seq331 107 2e-18 seq376 91.5 1e-13 seq5307 89.7 5e-13 seq920 89.7 5e-13 seq717 82.4 8e-11 >seq265 Length=2261556 Score = 111 bits (122), Expect = 2e-19 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || ||||| |||||||||||||||||||| | ||| || | Sbjct 841133 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 841075 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| ||||| ||| | |||||||| || || || ||||| Sbjct 841074 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTC 841015 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || || | ||| || || | ||| || ||||| || Sbjct 841014 CTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGT 840955 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || ||||| | ||||| |||||||| ||||| ||| Sbjct 840954 GATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATCTTG 840912 >seq808 Length=762264 Score = 109 bits (120), Expect = 6e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || ||||| |||||||||||||||||||| | ||| | | || Sbjct 448029 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-GATATG 447971 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| ||||| |||| | |||||||| || || || ||||| Sbjct 447970 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 447911 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || || | ||| || || | ||| || ||||| || Sbjct 447910 CTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGT 447851 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | ||||| | |||||| ||||| Sbjct 447850 GATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812 >seq331 Length=2147541 Score = 107 bits (118), Expect = 2e-18 Identities = 159/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || ||||| |||||||||||||||||||| | ||| || | Sbjct 851459 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 851401 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| ||||| ||| | |||||||| || || || ||||| Sbjct 851400 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTC 851341 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || || | ||| || || | ||| | | ||| || Sbjct 851340 CTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGT 851281 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || ||||| || ||||| |||||||| ||||| ||| Sbjct 851280 GATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCATCTTG 851238 >seq376 Length=1527771 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/223 (70%), Gaps = 9/223 (4%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || ||||| |||||||||||||||||||| | ||| || || Sbjct 1196500 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTATG 1196442 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| | ||| |||| | |||||||| || || || ||||| Sbjct 1196441 TCCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 1196382 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || ||| ||| || | ||| || || | ||| || || || || Sbjct 1196381 CTTATCCTGGCCTTTACATTT-------TCTATTGTATCCGAGGGTTCAACCTCCAGGGT 1196329 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | || || |||||||| ||| | ||| Sbjct 1196328 GATGGTCTTCCCAGTAAGGGTCTTCACGAAAATCTGCTTCTTG 1196286 >seq5307 Length=1324 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || || | ||| | |||||| ||||| || || || || || ||||| Sbjct 955 CCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAG 896 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||||||||| |||||||||| ||||||||| || || || Sbjct 895 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 836 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| ||||| |||| | || | ||||| | || || Sbjct 835 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACC 776 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | || || || || || ||||| Sbjct 775 TCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729 >seq920 Length=534542 Score = 89.7 bits (98), Expect = 5e-13 Identities = 155/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||| | || || || ||| | |||||||||||||||||||| | ||| || | Sbjct 150013 AGTCTCAACCCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 150071 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| ||||| |||| | |||||||| || || || ||||| Sbjct 150072 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 150131 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || | || || || || || || ||| || || | ||| || | ||| || Sbjct 150132 CTTATTCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAGGGT 150191 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | ||||| |||||||| ||||| ||| Sbjct 150192 GATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTTG 150234 >seq717 Length=839118 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || ||||| || || || || || |||| | ||| | Sbjct 563452 AGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGG 563511 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || |||||||||||||||||||||| | ||||||| || || || ||||| || Sbjct 563512 CCATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCC 563571 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| ||||| |||||| || | ||||| | || || || || || Sbjct 563572 TTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTG 563631 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | || || || || || ||||| Sbjct 563632 ATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505350570358920