Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq23 109 8e-19 >seq23 Length=7404865 Score = 109 bits (120), Expect = 8e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 214001 ATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTTACGAA 214060 ||||| || || || || ||||| || ||||| || | | ||| | ||| | || Sbjct 3588412 ATTGATGGAGAGGTGTATCCTCCCACAGTCAAAGATTCTCAGGTGGAGATGATCTATCCC 3588353 Query 214061 CCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCC 214120 || || || ||| | | || || || |||| | ||| |||| || || ||||| Sbjct 3588352 CCTCATGTCCCTGAACACCTGCGGTTTGCTGTGGGGCAGGAGGTGTTCGGCCTGGTGCCT 3588293 Query 214121 GGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTG 214180 || | ||| |||| |||| || ||||| ||||||||||||| || || || ||||| Sbjct 3588292 GGCCTGATGATGTATGCCACGATTTGGCTTCGAGAGCACAACAGAGTGTGTGATGTGCTT 3588233 Query 214181 AAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 ||||| ||||| ||||||||| | || || ||| ||||||||| Sbjct 3588232 AAACAGGAGCATCCGGAATGGGATGATGAGCAGTTGTTCCAGA 3588190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723272344835040