Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq927 425 8e-114
seq636 136 5e-27
seq138 132 7e-26
seq861 113 6e-20
seq1 111 2e-19
seq156 91.5 2e-13
>seq927
Length=612318
Score = 425 bits (470), Expect = 8e-114
Identities = 656/934 (70%), Gaps = 7/934 (1%)
Strand=Plus/Plus
Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 39326
|||| |||||| |||| || | |||| ||| ||| | | |||||| ||||| |||
Sbjct 153564 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCTATTC 153623
Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386
| || || || || || | ||||| || || ||||| || ||||||| ||| ||||| |
Sbjct 153624 TCTGATACTCTCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCT 153683
Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446
||||||| ||||| || || | | | | | || |||| || | || || |
Sbjct 153684 CCATGAAGTCAAATGGGTTTTCTACTCTGAAAATCTTGCTAAAACCCAGCTCCAGCATAA 153743
Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506
||| ||||| |||||||| ||| | ||||| | |||||||| || ||||| |
Sbjct 153744 GTCTGTCTGCCACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCATCCCAATGAGCT 153803
Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG 39566
| || || | ||||| || || ||||| | ||| || ||| || | |||||
Sbjct 153804 TCACCGGCAATGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCATTGACAATTATTT 153863
Query 39567 ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGT 39626
| | ||| || || ||| || | | ||||| ||||| | |||||| ||||
Sbjct 153864 CTTTGACTTTCTGCTCCGAAGGTTTGTGTATCAGGTGTTTGAACATCAGGCAGGCAAAGT 153923
Query 39627 CACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTA 39686
|||| |||| ||||||||||| ||||| | |||||| ||||||||||| |||| ||| |
Sbjct 153924 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGACATCA 153983
Query 39687 GACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTA 39746
| || | || |||||||| ||||| | |||||||| |||||||||||||| ||||| |
Sbjct 153984 GTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCA 154043
Query 39747 CTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACTTCT 39803
|||| ||||| || |||| | ||||| || | | || || | ||||| |
Sbjct 154044 CTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGCA 154103
Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863
|||||||| || |||||||| |||||||||||||| || || || || |||||| | |
Sbjct 154104 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTGAAGAGACACT 154163
Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923
|||| | |||||||| ||| || || | | ||||||||||| || |||||
Sbjct 154164 CCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACATCTCAGAATGTT 154223
Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983
|| |||| || || || || || || || ||||| | ||||| ||||| || | |||
Sbjct 154224 TG-TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAATTTCTT 154282
Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043
| ||| | ||| |||| |||||||| ||||| |||||||| || ||||| || || |
Sbjct 154283 GGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGCAA 154342
Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103
||||| ||||||||| | ||||| || ||| | ||||| | || || |
Sbjct 154343 GAACATGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAGTGCTGGAGGTCCT 154402
Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCC 40163
| || | ||| ||||| |||||||||||||| || ||||| || || || ||||| | ||
Sbjct 154403 TGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTCTTATACATCTGCC 154462
Query 40164 ATATATCACGATATTGTATTGGAAAAATAACAAA 40197
| |||||| | |||| || ||||| | |||||
Sbjct 154463 AAATATCATGGTATTCGATAGGAAAGACGACAAA 154496
>seq636
Length=1077480
Score = 136 bits (150), Expect = 5e-27
Identities = 110/133 (83%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778
|||||||| || || || |||||||||||||| || || |||||||||||||| | ||
Sbjct 918550 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATATGGTTCAATGGAC 918491
Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838
||||||||||||||||| ||||||||||| ||||| ||||| || || | | |||||||
Sbjct 918490 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTA 918431
Query 68839 TTTCTAAGACCAT 68851
|| || | |||||
Sbjct 918430 TTCCTTATACCAT 918418
Score = 114 bits (126), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390
|| |||| || | ||| |||||||| ||||| || || || | || || || ||||| |
Sbjct 886356 CACCACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCA 886297
Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450
|||| ||||||||||| || | ||||| | || || ||| |||| ||||| || ||||
Sbjct 886296 GAATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTAT 886237
Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501
||| ||| | ||| || || || | |||| ||||| || ||||||||||
Sbjct 886236 CTAGTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 886186
Score = 89.7 bits (98), Expect = 7e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
||||||||||| || ||||| ||||||||||| || | || || || |||| | |
Sbjct 899269 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGC 899210
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
||||| |||||||| || || || | ||| |||||||| | || || ||||||| |||
Sbjct 899209 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGT 899150
Query 69715 TCTAGATATATCGC 69728
|| || || || ||
Sbjct 899149 TCCAGGTAAATAGC 899136
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050
|| || ||||| || | || ||||| || || || ||||| | |||||||| || |||
Sbjct 891287 GTACCAGCATTGAAGAGAGTGGGAGAAGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 891228
Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110
|||||||||||||| | || ||||| | ||||| || | | || | |||||||
Sbjct 891227 TATGTTTCAATAGCAGCATCAATATCTTCTTCGTGAATCCCCACAGATACCCTCATCAAC 891168
Query 70111 ATATGCTGAGGTCGTTC 70127
||||| ||||||| |||
Sbjct 891167 ATATGTTGAGGTCTTTC 891151
>seq138
Length=3455650
Score = 132 bits (146), Expect = 7e-26
Identities = 105/126 (83%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| ||||| | |||||| ||||||||||| |||||||| || || || || |
Sbjct 2542790 CCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2542849
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
||||||| ||||| | |||||||| || ||||||||||| ||||| ||||| ||||| |
Sbjct 2542850 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAG 2542909
Query 39759 CAACAA 39764
| ||||
Sbjct 2542910 CCACAA 2542915
>seq861
Length=819057
Score = 113 bits (124), Expect = 6e-20
Identities = 98/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700
|||||||| || || | ||| || ||||| |||||||||||||| ||||| | || ||
Sbjct 774702 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCTTT 774643
Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760
||||| ||||| |||||||||||||| || ||||| | |||||||| || ||||| ||
Sbjct 774642 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGGCC 774583
Query 39761 AC 39762
||
Sbjct 774582 AC 774581
>seq1
Length=12387654
Score = 111 bits (122), Expect = 2e-19
Identities = 247/366 (67%), Gaps = 11/366 (3%)
Strand=Plus/Minus
Query 37338 TTATTTCAGTCCTGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACCATCTAGAGAT 37395
||| ||| ||| || || ||||| ||| ||| | ||| | ||| |||||| | |
Sbjct 7595582 TTAATTCTTTCCAGTGGAACCAAAACCTCCTGAACCCCTTTTAGTGT--CATCTAAAACT 7595525
Query 37396 TGTACTTCATTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCG 37455
| ||||| | | ||||||||| | || |||| | | || ||||| || |||| ||
Sbjct 7595524 TAGACTTCCTCTATTTCAGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGGTCA 7595465
Query 37456 CCCGTATTTATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCC 37515
||| | || | || ||| || ||| ||| ||| | ||| | || |||||||| ||
Sbjct 7595464 CCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAATATTTCCT 7595405
Query 37516 CTATAATCTTCATCGATTACTCCGCCTCCTACATCAAT---ACCTTTTAGAGACAAACCC 37572
|| ||||||||||| || || || |||||| |||||| | |||| || ||| ||
Sbjct 7595404 CTGTAATCTTCATCTATGACACCAGCTCCTATATCAATGAAATATTTTGCAGCCAAGCCA 7595345
Query 37573 GATCTAGGAGCTATTCTTCCATAACAAAATTTGGGCATAGACATCCGAATATCTGTTTTA 37632
|| | ||| ||| ||||||||| || || | || |||| |||| || |||||
Sbjct 7595344 GAACATGGAACTACTCTTCCATAGCACCCAGAAGGAAGAGCCATCTGAATGTCGGTTTTC 7595285
Query 37633 ATCAATTGTCTTTCTCC--AGGAAGGATGGTATAATCGTACGCGCTATATAAATCATATC 37690
| | | ||||||| ||| | | || ||||| || || || || | ||||| |
Sbjct 7595284 ACTA--CGATTTTCTCCATAGGTGGTAATGTGTAATCATAGGCACTGTACAGGTCATAGC 7595227
Query 37691 CCGCGG 37696
||||||
Sbjct 7595226 CCGCGG 7595221
>seq156
Length=3029033
Score = 91.5 bits (100), Expect = 2e-13
Identities = 179/258 (69%), Gaps = 10/258 (4%)
Strand=Plus/Plus
Query 37338 TTATTTCAGTCCTGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACCATCTAGAGAT 37395
||| ||| ||| || || ||||| ||| ||||| ||| | ||| |||||| | |
Sbjct 18934 TTAATTCTTTCCAGTGGAACCAAAACCTCCTGAGCCCCTTTCAGTGT--CATCTAAAACT 18991
Query 37396 TGTACTTCATTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCG 37455
|| ||||| | | || |||||| | || ||| | | || ||||| || |||| ||
Sbjct 18992 TGAACTTCCTCTATTTCTGGATAAAA-ATCTGTTCACAAATGAGCTGTGCAATTCGGTCA 19050
Query 37456 CCCGTATTTATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCC 37515
||| | || | || ||| || ||| ||| ||| | ||| | || |||||||| ||
Sbjct 19051 CCCTTTTTGACTTCAAACTTTTCTTTGCCAA-ATTAAACAGTACAACACCAATATTTCCT 19109
Query 37516 CTATAATCTTCATCGATTACTCCGCCTCCTACATCAAT---ACCTTTTAGAGACAAACCC 37572
|||||||||||||| || || || |||||||||| || | |||| || ||| ||
Sbjct 19110 CTATAATCTTCATCTATGACACCAACTCCTACATCTATGAAATGTTTTGCAGCCAAGCCA 19169
Query 37573 GATCTAGGAGCTATTCTT 37590
||| ||||||| ||||
Sbjct 19170 GAT-GCGGAGCTACTCTT 19186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686843792668440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |