Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_027384.1
Length=37359
Score E
Sequences producing significant alignments: (Bits) Value
seq5790 104 6e-18
>seq5790
Length=1233
Score = 104 bits (114), Expect = 6e-18
Identities = 174/250 (70%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 14081 GAGGCGATCAAGGCGGAGCTGGAGTTCAATCCGCGCCT--GGCCATGGACTTCCCCCAGG 14138
||||| || ||||| |||||| ||| ||||| || || | ||| ||||| | |
Sbjct 302 GAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTTCGGTC--GGATTTCCCGGATG 359
Query 14139 GCGCCGGCAAGGGCCGCGTCTGGCAAGTCGGCACCATCGTTACGGCGAACGATGCCAAGG 14198
||||||||| || ||||||| | ||| || |||| | | | | | |
Sbjct 360 CGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTATTACCCGTACCAACGTAATGA 419
Query 14199 TCCAGGTCTTCGGCTCCGGCAAGCGGATGCGCGGCCTTCGACACGGCCCGCACCGTCCTG 14258
||| || | ||||| ||||| || | |||||||| | |||||||| || |||| || |
Sbjct 420 TCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCGACACGGTCCATACCGACCCG 479
Query 14259 ACCTGGTGGTCGGCGACGACCTGGAGAACGACGAGAACGTCCGCAGCCCGGAGCAGCGCG 14318
|||| || || ||||||||||||||||||||| |||||| ||||| ||||| |
Sbjct 480 ACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGTCCGCGTGCCGGATCAGCGGG 539
Query 14319 ACAAGCTGGA 14328
|||| ||||
Sbjct 540 ACAAATTGGA 549
Score = 95.1 bits (104), Expect = 3e-15
Identities = 153/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 14786 GACCCGTCCCTTGGCAGGCAAGGTACCAGA--CGCGACCCCAGCGCCATCCTGGTGGGTG 14843
|| ||||| || || | || || || ||| || ||||| |||||||||| | ||||
Sbjct 930 GATCCGTCGCTCGGAAAGC--GGAACAAGAGCCGTGACCCATCCGCCATCCTGATCGGTG 987
Query 14844 GGTTCAATCGGGAAACAGGTGTCCTGGACGTGGTCGAGGCCGGTATCCGCAAGCGCCTGC 14903
|| | | ||| || || |||||||||||||||| |||||| || ||||
Sbjct 988 GGATGGACCGGCTGACCGGCAAGATGGACGTGGTCGAGGCATCAATCCGCCGCCGTCTGC 1047
Query 14904 CGGACAAGATCATCGAGGACATCATCACCATGCAGCGGGCCTATCGCTGCCTGGTCTGGG 14963
|||||| |||||||| ||| | |||| | | ||||| | ||||| || || | |||
Sbjct 1048 CGGACATGATCATCGCGGATACCATCGCGCTTCAGCGAGAGTATCGGTGTCTCTTGTGGT 1107
Query 14964 GCGTTGAGGCGGTCCAGTTCCAGGAGTTCCTGCGCACC 15001
||| || ||||||||||||| |||||| | |||
Sbjct 1108 TCGTGGAAAGCATCCAGTTCCAGGAATTCCTGAGGACC 1145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119416462822942
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |