Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_027384.1 Length=37359 Score E Sequences producing significant alignments: (Bits) Value seq5790 104 6e-18 >seq5790 Length=1233 Score = 104 bits (114), Expect = 6e-18 Identities = 174/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 14081 GAGGCGATCAAGGCGGAGCTGGAGTTCAATCCGCGCCT--GGCCATGGACTTCCCCCAGG 14138 ||||| || ||||| |||||| ||| ||||| || || | ||| ||||| | | Sbjct 302 GAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTTCGGTC--GGATTTCCCGGATG 359 Query 14139 GCGCCGGCAAGGGCCGCGTCTGGCAAGTCGGCACCATCGTTACGGCGAACGATGCCAAGG 14198 ||||||||| || ||||||| | ||| || |||| | | | | | | Sbjct 360 CGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTATTACCCGTACCAACGTAATGA 419 Query 14199 TCCAGGTCTTCGGCTCCGGCAAGCGGATGCGCGGCCTTCGACACGGCCCGCACCGTCCTG 14258 ||| || | ||||| ||||| || | |||||||| | |||||||| || |||| || | Sbjct 420 TCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCGACACGGTCCATACCGACCCG 479 Query 14259 ACCTGGTGGTCGGCGACGACCTGGAGAACGACGAGAACGTCCGCAGCCCGGAGCAGCGCG 14318 |||| || || ||||||||||||||||||||| |||||| ||||| ||||| | Sbjct 480 ACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGTCCGCGTGCCGGATCAGCGGG 539 Query 14319 ACAAGCTGGA 14328 |||| |||| Sbjct 540 ACAAATTGGA 549 Score = 95.1 bits (104), Expect = 3e-15 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 14786 GACCCGTCCCTTGGCAGGCAAGGTACCAGA--CGCGACCCCAGCGCCATCCTGGTGGGTG 14843 || ||||| || || | || || || ||| || ||||| |||||||||| | |||| Sbjct 930 GATCCGTCGCTCGGAAAGC--GGAACAAGAGCCGTGACCCATCCGCCATCCTGATCGGTG 987 Query 14844 GGTTCAATCGGGAAACAGGTGTCCTGGACGTGGTCGAGGCCGGTATCCGCAAGCGCCTGC 14903 || | | ||| || || |||||||||||||||| |||||| || |||| Sbjct 988 GGATGGACCGGCTGACCGGCAAGATGGACGTGGTCGAGGCATCAATCCGCCGCCGTCTGC 1047 Query 14904 CGGACAAGATCATCGAGGACATCATCACCATGCAGCGGGCCTATCGCTGCCTGGTCTGGG 14963 |||||| |||||||| ||| | |||| | | ||||| | ||||| || || | ||| Sbjct 1048 CGGACATGATCATCGCGGATACCATCGCGCTTCAGCGAGAGTATCGGTGTCTCTTGTGGT 1107 Query 14964 GCGTTGAGGCGGTCCAGTTCCAGGAGTTCCTGCGCACC 15001 ||| || ||||||||||||| |||||| | ||| Sbjct 1108 TCGTGGAAAGCATCCAGTTCCAGGAATTCCTGAGGACC 1145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119416462822942