Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq927 351 8e-92
seq67 100 2e-16
seq154 96.9 3e-15
seq138 93.3 3e-14
seq861 89.7 4e-13
>seq927
Length=612318
Score = 351 bits (388), Expect = 8e-92
Identities = 652/944 (69%), Gaps = 26/944 (3%)
Strand=Plus/Minus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|||||||| ||||| || |||| ||||| || ||||| ||||| || ||||| ||||
Sbjct 154496 TTTGTCGTCTTTCCTATCGAATACCATGATATTTGGCAGATGTATAAGAAAGCGGAGGCT 154437
Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCAT 43817
|| ||||||||||| || ||||| ||| | | || ||| | ||||| ||| ||
Sbjct 154436 TCCTTTTGGACAGCTGAGGAAGTGGATCTCTCCAAGGACCTCCAGCAC--TGGGAAGCCC 154379
Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877
| || || | || | | |||||||||| ||| | || || ||||||||||| || |
Sbjct 154378 TGAAGCCTGATGAGAGATATTTTATATCCCATGTTCTTGCTTTCTTTGCTGCGAGTGATG 154319
Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCA 43936
| |||||||||||||| ||||| |||||| |||||| |||| ||||| ||||||
Sbjct 154318 GCATAGTCAATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAATTCAGATTAC-AGAAGCC 154260
Query 43937 CGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTT 43996
|| ||||| ||||| || ||||||||||| | ||| | ||||| || ||||| |||||
Sbjct 154259 CGCTGTTTCTATGGCTTCCAAATTGCCAT-GGAAACAAACATTCTGAGATGTATAGTCTC 154201
Query 43997 CTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
|| | || ||||| || |||||| | || | | | | | || || || || ||
Sbjct 154200 CTCAATGACACGTATATTAAAGATTCCAAGGAAAGGGAGTGTCTCTTCAACGCCATTGAG 154141
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAAT 44113
||| | ||| | || | || ||||| |||||| | ||||| | | |
Sbjct 154140 ACAATGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGTTGGATTGGGGACAAAGAG 154081
Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | | ||||||||| |||| || ||||| | |||||||| || |||||||| ||
Sbjct 154080 GCTACCTATGGAGAACGTGTTGTAGCTTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGT 154021
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| | ||||| ||| | |||||| |||| ||||| |||| | || |||||
Sbjct 154020 TCTTTTGCATCGATATTCTGGCTCAAGAAATGAGGACTGATGTCTGGCCTCACATTTTCC 153961
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
|| || | || || | ||||| || ||||| || || ||||| ||| || | | |
Sbjct 153960 AACGAACTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAA 153901
Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353
| || || || | || ||||| ||| | | | ||| || |||| | || |||
Sbjct 153900 CACCT--GATAC-ACAAACCTTCGGAGCAGAAAGTCAAAGAAATAATTGTCAATGCTGTA 153844
Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGA 44412
| ||||||||| || || | ||| ||||| || || || | || || ||||| ||
Sbjct 153843 AGGATAGAACAGGAGTTCCTCACAGAGGCATTGCCGGTGAAGCTCATTGGGATGAATTGC 153784
Query 44413 ACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTG 44472
|| ||| ||||| || | ||||||| | ||||| | | | |||| |||||||
Sbjct 153783 AC-TTTAATGAAGCAGTGCATTGAATTTGTGGCAGACAGACTTATGCTGGAGCTGGGTT- 153726
Query 44473 CGATAAACACTATATT----GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGG 44528
| | || || || ||| ||||||| ||||| || ||||| |||||||| |||
Sbjct 153725 ---TTAGCAAGATTTTCAGAGTAGAAAACCCATTTGACTTCATGGAGAATATTTCACTGG 153669
Query 44529 AAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATGA 44588
|||| || || ||||| ||||| || | || ||||| |||||| |||| || || |||
Sbjct 153668 AAGGGAAGACTAACTTCTTTGAGAAGAGAGTAGGAGAGTATCAGAGAATAGGAGTGATGT 153609
Query 44589 TAA---CAAGTGACAATAAATTTACTACGGATGAAGATTTCTAA 44629
|| ||| || ||| ||||| ||||| || ||||||
Sbjct 153608 CAAGTCCAACAGAGAATTCTTTTACCTTGGATGCTGACTTCTAA 153565
>seq67
Length=4940759
Score = 100 bits (110), Expect = 2e-16
Identities = 170/239 (71%), Gaps = 8/239 (3%)
Strand=Plus/Plus
Query 47201 CATTGGTTTTA-CAACGTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATT 47259
|| |||||| | || ||| | || ||||||||||| ||| | ||| | || ||| | |
Sbjct 3063490 CAGTGGTTTCAGCAGTGTGCTACAGTTTTTAGGACTATATAAGAAAACTGGCAAATTGGT 3063549
Query 47260 ATTTCTCGGGTTAGACAATGCAGGAAAAACGGCATTACTCCACATGCTCAA--AT-ACAA 47316
|||||| | || || ||||| |||||| | | || |||||||| | || |||
Sbjct 3063550 ATTTCTTGCATTGGATAATGCTGGAAAATAAT-ACTGCTACACATGCTACATGATGACAG 3063608
Query 47317 TTGCATGAAAGAGCATAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGG 47376
|| || | | ||| ||| | |||||||| ||||| ||| ||||||| ||||||||
Sbjct 3063609 --GCTTGGACAA-CATGTCCCAATGTTACATCCCACCTCAGAAGAACTAACCATTGCTGG 3063665
Query 47377 CATAACATTTAGCACATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAA 47435
||| || || | || |||||| | || ||||| ||||||| || ||| | ||| |||
Sbjct 3063666 CATGACCTTCACAACTTTTGATCTGGGTGGACATGTTCAAGCTCGAAGAGTATGGAAAA 3063724
>seq154
Length=3096186
Score = 96.9 bits (106), Expect = 3e-15
Identities = 295/450 (66%), Gaps = 12/450 (3%)
Strand=Plus/Plus
Query 77243 GCTCCCTCTCGTGCCAGCCGGTCGGCCTCCTCATTGCCTTTGTATCCTGCGTGTCCTGGG 77302
||||| |||| || |||| ||| || ||||| |||||| |||||| || || ||
Sbjct 2324524 GCTCCTTCTCTCGCTAGCCTGTCAGCTTCCTCGTTGCCTACAAATCCTGAATGGCCAGGA 2324583
Query 77303 ATGTGCAGCCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCC 77362
| |||| ||| | |||| || ||||| |||||| || ||||| ||
Sbjct 2324584 ACATGCATCCACTGGATGTCCATGCCCTGGACGAGTTTCTCCAGCCCCACGAAGTCCTCT 2324643
Query 77363 TTGTTGA-CAACTGACCCTCC--GC-CATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTT 77418
||||||| || || || ||| || | || ||||| || |||| |||||| |
Sbjct 2324644 TTGTTGATCACCT--CCTTCCCGGCGCTTGTT--CTCCACCCATTCTTCTTCCAACCTTG 2324699
Query 77419 AACCCACTTAGTCACACCATTGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTT 77478
|||||| || || | || |||||||| ||||| ||||||||||| | |||||||||||
Sbjct 2324700 AACCCAGTTGGTGATCCCGTTGATGGTAAACATACTGTCTGTGTATAGAACCAGCTTCTT 2324759
Query 77479 GATTTTGTTCTCCTGAGCTTGTTGCAGTGCTTTGGATGCAGCCTGGATTTCAGCGCGCTG 77538
||| || | || || |||| | |||| ||||| || ||||| || ||
Sbjct 2324760 GATGTTTTGAGCCCTTGCCTGTTCGATGGCTT----TGCAGGATGAATTTCTGCTGTTTG 2324815
Query 77539 GTTTGTCTGTTGCCCCACAAGTCGCTCTGCAACATTAAGCGGGTGATTATAACCCCAATA 77598
||| || ||| |||| ||||| | | || || || || ||||| ||
Sbjct 2324816 GTTGGTTTGTCGCCCAGGAAGTCTAATACCTATGTTTAGAGGATGGCCGGGGCCCCAGTA 2324875
Query 77599 TACGCCAATGCCAGCTCGGGCTTGTTTCTGTCCGTTTGATAAGCAACAGCCGTCAGTGTA 77658
|| || || || ||||| || || | || || |||| ||||| ||||||||
Sbjct 2324876 AACACCGATTCCTGCTCGCGCCCTCCTCCGCCCATTACTGCAGCAGCAGCCATCAGTGTA 2324935
Query 77659 GACCACCACGGCGTCACCCATGTACGTGAA 77688
||| || || || |||||||| | |||
Sbjct 2324936 GACGACGACATATTCTCCCATGTAAGAGAA 2324965
>seq138
Length=3455650
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182
|||||||| |||| || ||||| | |||||||| || |||||||| || || |||||
Sbjct 2542925 GGAGAACGTGTTGTGGCTTTTGCCGCAGTGGAAGGAATCTTCTTTTCCGGTTCTTTTGCA 2542866
Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242
| ||||| ||| | ||||||||||| |||||||||| | || ||||| || || |
Sbjct 2542865 TCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAACGAACTT 2542806
Query 44243 ATAAGTCGTGATGA 44256
|| || | |||||
Sbjct 2542805 ATTAGCAGAGATGA 2542792
Score = 93.3 bits (102), Expect = 3e-14
Identities = 93/118 (79%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 43904 CGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962
|||||| |||||| |||| ||||| |||||| || || || ||||| || ||||||||
Sbjct 2544577 CGGTTTAGCCAAGAAATTCAGATTAC-AGAAGCCCGCTGCTTCTATGGCTTCCAAATTGC 2544519
Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
||| ||||| || ||||| || ||||| ||||| || || || || || || ||||||
Sbjct 2544518 CATGGAAAACATACATTCTGAGATGTATAGTCTCCTCATTGACACTTATATTAAAGAT 2544461
>seq861
Length=819057
Score = 89.7 bits (98), Expect = 4e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| |
Sbjct 784379 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGA 784438
Query 44553 AACGCGTTGGAGAATATCAGCG 44574
|||| ||| ||| ||||||||
Sbjct 784439 AACGAGTTTCAGAGTATCAGCG 784460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397419326113855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |