Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 95.1 1e-14
seq717 82.4 6e-11
>seq5307
Length=1324
Score = 95.1 bits (104), Expect = 1e-14
Identities = 163/235 (69%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | ||||| |||| || || ||||| || ||||| |||||
Sbjct 955 CCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAG 896
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | || || |||||||| || || |||| |||||||| || || || ||
Sbjct 895 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 836
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT--ACAGTGTCTGTGGCTTCAA 27198
| ||||| || || ||| || ||| || |||| | |||||| ||| || |
Sbjct 835 ATGCCCTCCTTGTCTTGGATTTTAGCTTT--GGCATTCTCAATAGTGTCACTGGGCTCGA 778
Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
| || || || || | ||||||||||| || ||||||||||| ||||| ||||
Sbjct 777 CCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 723
>seq717
Length=839118
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || ||||| || ||||| |||| | |||| | || ||
Sbjct 563461 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCCTCC 563520
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|||||||| || || |||| ||| |||| || || || || | ||||| || || |
Sbjct 563521 AGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 563580
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|| || ||| | | || | |||||| ||| || || || || || || | |||
Sbjct 563581 ATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTTG 563640
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
|||||||| || ||||||||||| ||||| ||||
Sbjct 563641 CCCGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 563675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424895190638952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |