Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4355 91.5 2e-13 >seq4355 Length=1689 Score = 91.5 bits (100), Expect = 2e-13 Identities = 276/423 (65%), Gaps = 14/423 (3%) Strand=Plus/Minus Query 79380 CTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTC 79439 || |||||| |||||||| ||||| || || | |||| || ||| || Sbjct 1007 CTTCATGAACAGGTCCGGAATCCAGTTCGCGGTATTCATGTCGTGGGTACGGCGACGGTC 948 Query 79440 GTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAG 79499 ||| || |||| ||||||||||| || ||| |||||| |||||| | ||||| Sbjct 947 GTCACCGGTGTTCTTGCGCAGCTCGAGGAATTCCTCGATGTCCAGGTGCCAGGTTTCCAG 888 Query 79500 ATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTT 79559 ||| | || || ||||||||||||| ||||||||||||| ||| |||| Sbjct 887 GTAGGCGCAGACCGCGCCCTTGCGCTTGC---CGCCCTGGTTGACCGCGACGGCGGTGTC 831 Query 79560 GTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCG 79619 ||||| ||| || | |||||||| ||| | || |||||| || || ||||| Sbjct 830 GTTGACCACTTTCAGGAAGGGCACGACGCCCTGGGATTTGCCGTTGGTGCCCTTGATGTA 771 Query 79620 TGTACC----GCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGG 79675 | ||| || ||| | | | || |||| | | || | ||| |||| | |||| Sbjct 770 GGCACCCAGTGCGCGCAC-AGGGGTC---CAGTCGTTGCCCAGGCCGCCGGCGAATTTGG 715 Query 79676 AGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAG 79735 ||| | ||| || || | ||||||||||| | | ||||||| || | Sbjct 714 AGAGCAGGGCGTTATCGCGGATGGCGTCGTAGATGCCACC---CAGGTCGTCCGGCACGG 658 Query 79736 CGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCG 79795 | |||| ||||| |||| ||| || || ||||||||||| |||||||||| Sbjct 657 TGGTCAGGTAGCAGGAGGACAGCTGCGGACGCAGGGTGCCGGCGTTGAACAGGGTCGGCG 598 Query 79796 TCG 79798 ||| Sbjct 597 TCG 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548472888984240