Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq4355 91.5 2e-13
>seq4355
Length=1689
Score = 91.5 bits (100), Expect = 2e-13
Identities = 276/423 (65%), Gaps = 14/423 (3%)
Strand=Plus/Minus
Query 79380 CTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTC 79439
|| |||||| |||||||| ||||| || || | |||| || ||| ||
Sbjct 1007 CTTCATGAACAGGTCCGGAATCCAGTTCGCGGTATTCATGTCGTGGGTACGGCGACGGTC 948
Query 79440 GTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAG 79499
||| || |||| ||||||||||| || ||| |||||| |||||| | |||||
Sbjct 947 GTCACCGGTGTTCTTGCGCAGCTCGAGGAATTCCTCGATGTCCAGGTGCCAGGTTTCCAG 888
Query 79500 ATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTT 79559
||| | || || ||||||||||||| ||||||||||||| ||| ||||
Sbjct 887 GTAGGCGCAGACCGCGCCCTTGCGCTTGC---CGCCCTGGTTGACCGCGACGGCGGTGTC 831
Query 79560 GTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCG 79619
||||| ||| || | |||||||| ||| | || |||||| || || |||||
Sbjct 830 GTTGACCACTTTCAGGAAGGGCACGACGCCCTGGGATTTGCCGTTGGTGCCCTTGATGTA 771
Query 79620 TGTACC----GCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGG 79675
| ||| || ||| | | | || |||| | | || | ||| |||| | ||||
Sbjct 770 GGCACCCAGTGCGCGCAC-AGGGGTC---CAGTCGTTGCCCAGGCCGCCGGCGAATTTGG 715
Query 79676 AGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAG 79735
||| | ||| || || | ||||||||||| | | ||||||| || |
Sbjct 714 AGAGCAGGGCGTTATCGCGGATGGCGTCGTAGATGCCACC---CAGGTCGTCCGGCACGG 658
Query 79736 CGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCG 79795
| |||| ||||| |||| ||| || || ||||||||||| ||||||||||
Sbjct 657 TGGTCAGGTAGCAGGAGGACAGCTGCGGACGCAGGGTGCCGGCGTTGAACAGGGTCGGCG 598
Query 79796 TCG 79798
|||
Sbjct 597 TCG 595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548472888984240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |