Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_028248.1 Length=136896 Score E Sequences producing significant alignments: (Bits) Value seq6988 143 2e-29 >seq6988 Length=1074 Score = 143 bits (158), Expect = 2e-29 Identities = 214/303 (71%), Gaps = 3/303 (1%) Strand=Plus/Plus Query 30720 ATCCCTCATTAAGCCCAGCCAAATGGAATGCTCCAGGCTATCATCGTAATGCTCAAAAGC 30779 ||||| |||||| |||| |||||||||||||||||| | ||||||||||||| || || Sbjct 462 ATCCCGCATTAAACCCAACCAAATGGAATGCTCCAGCCCATCATCGTAATGCGTGAATGC 521 Query 30780 CCTCCCGGTATTGAATGGTGGGTCTATGTAAACACACTTCACTTTGCCTGCATACTCTTG 30839 || ||||| || | || ||||| || |||| |||||||| || || | | | || || Sbjct 522 GCTACCGGTGTTATAGGGCGGGTCGATAAAAACGCACTTCACCTTTCCAGAAAATTCCTG 581 Query 30840 CTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGTTTATTATCAAAAATATC 30899 ||| |||||||||| || | | ||| || ||||| ||||| ||||| || || || Sbjct 582 CTCCAGCGCCTTCAGCGCCAGCAGGTTGTCGCCAAAGATCAGCCGGTTATCGAAGATGTC 641 Query 30900 GTTTTCGGTCAC---TTTCTGGCTGTGGTAAGATTTGCTAGAATCTTCTAACAAAATGTG 30956 ||| || ||||| | || ||| || || || | |||||| | || ||| | Sbjct 642 GTTGTCCGTCACGCGATGCTTCGCGTGATATGACTTTTCCGGATCTTCCAGCAGGATGCG 701 Query 30957 TGGCTCTAACTTTTTGCGCTCGTTTTTACCTATCCAGGTAAGTTCTAATTTGGTTTTGCT 31016 ||||| | ||| |||| | || || ||||| || ||||| | ||| ||||| Sbjct 702 CGGCTCCAGCTTGGGCCGCTTCTCCTTGCCGATCCAAGTCAGTTCAAGTTTTTGCTTGCT 761 Query 31017 CAT 31019 ||| Sbjct 762 CAT 764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 437897754528960