Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_028248.1
Length=136896
Score E
Sequences producing significant alignments: (Bits) Value
seq6988 143 2e-29
>seq6988
Length=1074
Score = 143 bits (158), Expect = 2e-29
Identities = 214/303 (71%), Gaps = 3/303 (1%)
Strand=Plus/Plus
Query 30720 ATCCCTCATTAAGCCCAGCCAAATGGAATGCTCCAGGCTATCATCGTAATGCTCAAAAGC 30779
||||| |||||| |||| |||||||||||||||||| | ||||||||||||| || ||
Sbjct 462 ATCCCGCATTAAACCCAACCAAATGGAATGCTCCAGCCCATCATCGTAATGCGTGAATGC 521
Query 30780 CCTCCCGGTATTGAATGGTGGGTCTATGTAAACACACTTCACTTTGCCTGCATACTCTTG 30839
|| ||||| || | || ||||| || |||| |||||||| || || | | | || ||
Sbjct 522 GCTACCGGTGTTATAGGGCGGGTCGATAAAAACGCACTTCACCTTTCCAGAAAATTCCTG 581
Query 30840 CTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGTTTATTATCAAAAATATC 30899
||| |||||||||| || | | ||| || ||||| ||||| ||||| || || ||
Sbjct 582 CTCCAGCGCCTTCAGCGCCAGCAGGTTGTCGCCAAAGATCAGCCGGTTATCGAAGATGTC 641
Query 30900 GTTTTCGGTCAC---TTTCTGGCTGTGGTAAGATTTGCTAGAATCTTCTAACAAAATGTG 30956
||| || ||||| | || ||| || || || | |||||| | || ||| |
Sbjct 642 GTTGTCCGTCACGCGATGCTTCGCGTGATATGACTTTTCCGGATCTTCCAGCAGGATGCG 701
Query 30957 TGGCTCTAACTTTTTGCGCTCGTTTTTACCTATCCAGGTAAGTTCTAATTTGGTTTTGCT 31016
||||| | ||| |||| | || || ||||| || ||||| | ||| |||||
Sbjct 702 CGGCTCCAGCTTGGGCCGCTTCTCCTTGCCGATCCAAGTCAGTTCAAGTTTTTGCTTGCT 761
Query 31017 CAT 31019
|||
Sbjct 762 CAT 764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 437897754528960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |