Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq612 170 2e-37
seq94 98.7 8e-16
seq183 87.8 1e-12
>seq612
Length=937308
Score = 170 bits (188), Expect = 2e-37
Identities = 399/597 (67%), Gaps = 5/597 (1%)
Strand=Plus/Plus
Query 29865 GCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGA 29924
|||| | ||||| || || | | || |||||| | ||| || |||| || |||| |
Sbjct 700468 GCTGCATTTTCAGTGGCTCAATGCAATTCAGGTAAATGTGTGCATCTCTCAAAGTGTGTA 700527
Query 29925 CAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGC 29984
| || | || | | || | |||| | || | || ||| ||||| || |||||||
Sbjct 700528 CCAAGTTACCTTGCTTCAGGTCCGTGATAAGTGCAACCACGTAGGTGAGCAGGGAGTAGC 700587
Query 29985 TGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCT--GACA 30042
|||| ||||| || || || | || |||| ||| | ||||||| | || | | ||
Sbjct 700588 TGGCAATGTTGAATGGCACACATAGGCCCACGTCGGCTGACCTCTAGAAGGGTTTCTTCA 700647
Query 30043 CGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCAT 30102
| | ||||| | || |||||| ||||| || | ||| |||||| ||||||| ||||
Sbjct 700648 CAACAGCTCACTGTTCACCACGTAGAACTGGCAAAGGGCATGGCACAGAGGAAGTTCCAT 700707
Query 30103 GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 30162
||| | ||||| || || || ||||||| | |||| | ||||| || |||||| |
Sbjct 700708 GAGAAAAAGATCTTTTGGATTTCAAGCGCACAGGGTGATTCCTCTGTCATCAGGGTTGGT 700767
Query 30163 CCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT 30222
|||| ||| | |||||||| || || || || || | || ||||
Sbjct 700768 TTTGATAGTGTCAGTCACCTTTTGCAGTTGGTCTACTCCTTGACCTGCATAATCTGAATC 700827
Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282
||| || |||| |||| ||| ||| |||||||||| || || || || || || | ||
Sbjct 700828 CATTTCTTTGTATTCTG-TCCCAAAAGCCTCCACTGAAAGCCATAAACTGGGCCTACATC 700886
Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342
|| ||||| ||| | | | || | | | | |||||| ||| | |||||| |
Sbjct 700887 CCCTTCTTCTCTGCAGGAGCATCGCCGGCTATAC-AGAAGTCTGGGGACCTGTTGGCATG 700945
Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 30402
|||||| | || ||||| | || ||||| | ||||||| || ||| |||||
Sbjct 700946 CCAGATTCTCACTCCCTTGGACCACAGGTCTTTAGCACTTGTGGATCCCTTGATAAACCA 701005
Query 30403 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459
|| || |||||||| || ||||||| || || | | ||| || | ||| |||||
Sbjct 701006 CAACAACTCCTCCAAAACAACCTTCCAGAATACACATTGGGTTGTCA-GAGAGGAAA 701061
>seq94
Length=4258012
Score = 98.7 bits (108), Expect = 8e-16
Identities = 99/126 (79%), Gaps = 2/126 (2%)
Strand=Plus/Plus
Query 110395 GGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTT 110454
|| || || || || || ||||| |||| || |||||||| | | ||||| ||||||
Sbjct 3581806 GGTTCCTTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTC 3581865
Query 110455 TCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCC-TCTGAC 110513
||||| ||||||||||| ||||| |||||||| || |||| ||||| || || |||| |
Sbjct 3581866 TCGGGAATGGAGAACCAGGTCTTCCTACCCATAATTACCAAATTCTGTTTACCTTCTG-C 3581924
Query 110514 TGAAGA 110519
||||||
Sbjct 3581925 TGAAGA 3581930
>seq183
Length=3056380
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460
|| || || || ||||| |||| || |||||||| | | ||| | |||||| || ||
Sbjct 88616 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGCCGATTCTTCTCAGGA 88675
Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508
||||||||||| ||||| |||||||| ||||||| ||||| || |||
Sbjct 88676 ATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTACCT 88723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406272909104532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |