Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq612 181 9e-41
>seq612
Length=937308
Score = 181 bits (200), Expect = 9e-41
Identities = 440/661 (67%), Gaps = 8/661 (1%)
Strand=Plus/Plus
Query 6494 ATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATG 6553
|||||||||||| ||| | ||||||| || |||| || || |||| |||
Sbjct 700434 ATTTTGAGCTGGAACGACGTT---GGCTCTCCATGACGCTGCATTTTCAGTGGCTCAATG 700490
Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCC 6613
|||||||| || || ||||| | ||| || || |||| | || | || ||
Sbjct 700491 CAATTCAGGTAAATGTGTGCATCTCTCAAAGTGTGTACCAAGTTACCTTGCTTCAGGTCC 700550
Query 6614 ACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCT 6673
|| | | || | || ||| |||||||| | ||| || ||||||||||| ||||| | |
Sbjct 700551 GTGATAAGTGCAACCACGTAGGTGAGCAGGGAGTAGCTGGCAATGTTGAATGGCACACAT 700610
Query 6674 AACCCCATGTCTCCCGATCGTTGATAGAGCTGG--CAGGACAGCTCCCCATTCGCGACGT 6731
| |||| ||| | || | | || | | || ||||||| | ||| | ||||
Sbjct 700611 AGGCCCACGTCGGCTGACCTCTAGAAGGGTTTCTTCACAACAGCTCACTGTTCACCACGT 700670
Query 6732 AGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCC 6791
|||| ||||| |||| |||||| | || || |||| ||| ||||| || || || |
Sbjct 700671 AGAACTGGCAAAGGGCATGGCACAGAGGAAGTTCCATGAGAAAAAGATCTTTTGGATTTC 700730
Query 6792 ACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACT 6851
| ||||||| ||| | ||||||||||||||| || | ||||| |||| | |
Sbjct 700731 AAGCGCACAGGGTGATTCCTCTGTCATCAGGGTTGGTTTTGATAGTGTCAGTCACCTTTT 700790
Query 6852 GCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAA 6911
|||| ||||| |||| || || | ||| || | || | | || || | |||||
Sbjct 700791 GCAGTTGGTCTACTCCTTGACCTGCATAATCTGAATCCATTTCTTTGTATTCTGTCCCAA 700850
Query 6912 AGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACC 6971
| | |||||||| || || || || ||||| | || || || || | | | | | |
Sbjct 700851 A-AGCCTCCACTGAAAGCCATAAACTGGGCCTACATCCCCTTCTTCTCTGCAGGAGCATC 700909
Query 6972 CCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACG 7031
||| | | ||| |||||| | |||| || || | |||||| |||| ||| ||||
Sbjct 700910 GCCGGCTATACAG-AAGTCTGGGGACCTGTTGGCATGCCAGATTCTCACTCCCTTGGACC 700968
Query 7032 AGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCT 7091
| || || || | | |||| ||| | | ||||||| || |||||| | || |||
Sbjct 700969 ACAGGTCTTTAGCACTTGTGGATCCCTTGATAAACCACAACAACTCCTCCAAAACAACCT 701028
Query 7092 TCCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTCGCCCCGAAGGTTGTATCGGGCCT 7151
||||| | |||| || || ||||| || |||||||| | | ||| ||| || ||||
Sbjct 701029 TCCAGAATACACATTGGGTTGTCAG-AGAGGAAATTCATCTCTCAGGCTGTGGCGTGCCT 701087
Query 7152 G 7152
|
Sbjct 701088 G 701088
Score = 181 bits (200), Expect = 9e-41
Identities = 440/661 (67%), Gaps = 8/661 (1%)
Strand=Plus/Minus
Query 34193 CAGGCCCGATACAACCTTCGGGGCGAATTTCCGCTGCTGACGACGAAACGTGTGTACTGG 34252
||||| || ||| ||| | | |||||||| || ||||| || || |||| | ||||
Sbjct 701088 CAGGCACGCCACAGCCTGAGAGATGAATTTCCTCT-CTGACAACCCAATGTGTATTCTGG 701030
Query 34253 AAGGGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTC 34312
|||| || | |||||| || ||||||| | | ||| |||| | | || || ||
Sbjct 701029 AAGGTTGTTTTGGAGGAGTTGTTGTGGTTTATCAAGGGATCCACAAGTGCTAAAGACCTG 700970
Query 34313 TCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGG 34372
| |||| ||| |||| |||||| | || || |||| | |||||| ||| | | |||
Sbjct 700969 TGGTCCAAGGGAGTGAGAATCTGGCATGCCAACAGGTCCCCAGACTT-CTGTATAGCCGG 700911
Query 34373 GGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACAC 34432
| | | | | | || || || || | ||||| || || || || |||||||| |
Sbjct 700910 CGATGCTCCTGCAGAGAAGAAGGGGATGTAGGCCCAGTTTATGGCTTTCAGTGGAGGCT- 700852
Query 34433 TTTGGGGCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTG 34492
|||||| | || || | | || | || ||| | || || |||| ||||| |||
Sbjct 700851 TTTGGGACAGAATACAAAGAAATGGATTCAGATTATGCAGGTCAAGGAGTAGACCAACTG 700792
Query 34493 CAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCG 34552
|| | |||| ||||| | || ||||||||||||||| | ||| |||||||
Sbjct 700791 CAAAAGGTGACTGACACTATCAAAACCAACCCTGATGACAGAGGAATCACCCTGTGCGCT 700732
Query 34553 TGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTC 34612
|| || || || ||||| ||| |||| || || | |||||| |||| ||||| |||
Sbjct 700731 TGAAATCCAAAAGATCTTTTTCTCATGGAACTTCCTCTGTGCCATGCCCTTTGCCAGTTC 700672
Query 34613 TACGTCGCGAATGGGGAGCTGTCCTG--CCAGCTCTATCAACGATCGGGAGACATGGGGT 34670
||||| | ||| | ||||||| || | | || | | || | ||| ||||
Sbjct 700671 TACGTGGTGAACAGTGAGCTGTTGTGAAGAAACCCTTCTAGAGGTCAGCCGACGTGGGCC 700612
Query 34671 TAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCG 34730
|| | ||||| ||||||||||| || ||| | |||||||| ||| || | || | | ||
Sbjct 700611 TATGTGTGCCATTCAACATTGCCAGCTACTCCCTGCTCACCTACGTGGTTGCACTTATCA 700552
Query 34731 TGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACC 34790
|| || | || | |||| || || ||| | ||||| || || ||||||||
Sbjct 700551 CGGACCTGAAGCAAGGTAACTTGGTACACACTTTGAGAGATGCACACATTTACCTGAATT 700492
Query 34791 ACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAA 34850
||| |||| || || |||| || ||||||| | ||| |||||||||||
Sbjct 700491 GCATTGAGCCACTGAAAATGCAGCGTCATGGAGAGCC---AACGTCGTTCCAGCTCAAAA 700435
Query 34851 T 34851
|
Sbjct 700434 T 700434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448219977567120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |